| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1426 |
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| Symbol | |
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| ID | 3933873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1395818 |
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| End bp | 1397038 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903776 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_509368 |
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| Protein GI | 89053917 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000154609 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.798297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGGCG TGATTTCGGG GCAGGCGGCG GAGACGTTGC CTGCCCTTTT TCCATCCAAA
GACACGCATA AGACATGGGG AGACGGGGAT ATGAGTGAGA CGGAGCCAGC GGCCGCAGGG
GGCCCGAATG ACGAGCGCAT AAAGGACCAG GGCGGCTTTC GAAAGTGGCT GATCCGGCCC
GAACTGGGCG GCATCGTCGG CGTCATCGCG GTGTTCATCT TCTTCGGCGT CCTCGCAGGC
GACAGCGGCA TGTTCAACGC GCAAGGCATC ATGAACTGGA GCCAGATCAG CGCACAATTC
ATGATCATCG CGGTCGGCGC CTGCATGTTG ATGGTGGCCG GAGAGTTTGA CCTGTCCGTC
GGCTCCATGA TTGGGTTTGC AGGCATTTCG ATTGCGATGT TCGGCGTGGT CTGGGGCCTG
CCGATGTGGG TCGCGATCCT GATCACCTTT GCCATCTGCC TCGTCATCGG GGCGATCAAC
GGCATCATCG TGGTGCGCAC CGGCCTGCCG AGTTTCATCG TGACGCTGGC CTTCCTGTTC
ATCCTGCGCG GCTTCACGAT TTTCGTGCCG CAAACCGTTG AAAGCCGGAC GATTATTGGC
GGGATCGAGG AGGCGGCGGA GGGCGACTGG CTGGCCGCGA TCTTCAACAC GGACGTCGCG
GGCTGGCTGT TCGTCTGGAT GGCCGACAAC GGCATCATCG GCACATTCTC GCGCGGGACC
CGGGAGGGGG AGCCGTTGAT CAGCGGCATT CCGATGCTGA TCGTCTGGGC CTTTATCCTG
GTCATCGCGG GGCACATCAT CCTGACGCGC ACCAAGTTCG GCAACTGGAT CTTCGCGGCG
GGCGGAGATG CGCAGGCGGC CCGCTATGTG GGCGTGCCGG TGGACCGGGT GAAGATCACC
ATGTTCATGA CGACGGCGTT CTGTTCAACA GTGTTCGCTT GCTGTCAGGT GTTTGAATTT
GGGTCCGCCG CCGCAGACCG GGGCATCCTG AAGGAGTTTG AGGCGATCAT CGCGGTGGTC
ATCGGAGGGG CGCTTTTGAC CGGGGGATAC GGCTCGGTCA TGGGGGCGGC GCTGGGGGCG
CTGATCTTCG GCGTCGTGCA GCAGGGGCTG TTCTTCGCGG ATGTGGAATC GAGCCTGTTC
CGGGTGTTTC TCGGCATCAT CCTTCTCTTC GCGGTGGTGC TGAACACCTA TATTCGCCGC
ATCATCACGG GGGAGCGTTG A
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| Protein sequence | MRGVISGQAA ETLPALFPSK DTHKTWGDGD MSETEPAAAG GPNDERIKDQ GGFRKWLIRP
ELGGIVGVIA VFIFFGVLAG DSGMFNAQGI MNWSQISAQF MIIAVGACML MVAGEFDLSV
GSMIGFAGIS IAMFGVVWGL PMWVAILITF AICLVIGAIN GIIVVRTGLP SFIVTLAFLF
ILRGFTIFVP QTVESRTIIG GIEEAAEGDW LAAIFNTDVA GWLFVWMADN GIIGTFSRGT
REGEPLISGI PMLIVWAFIL VIAGHIILTR TKFGNWIFAA GGDAQAARYV GVPVDRVKIT
MFMTTAFCST VFACCQVFEF GSAAADRGIL KEFEAIIAVV IGGALLTGGY GSVMGAALGA
LIFGVVQQGL FFADVESSLF RVFLGIILLF AVVLNTYIRR IITGER
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