Gene Jann_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1416 
Symbol 
ID3933863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1384739 
End bp1385725 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content59% 
IMG OID637903766 
Productmyo-inositol 2-dehydrogenase 
Protein accessionYP_509358 
Protein GI89053907 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0285646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0638843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAA TTGGGCTTCT GGGGTGTGGG CGGATCGGGC AGGTCCACGG GCGGACGATC 
AAGGCGCTGG ACAACGCACG GGTGGTTGCG GTCGCGGACG CCGTGCCCGC GGCCGCCAGC
GCCTTGGCGA GCATGTTGGG GGCAGACGTT CGCGCCGCCG AGGAGGTGTT GTCTGCAACG
GATATCGACG CCGTCGTTAT TGGTACGCCG ACATCCATTC ACTTCGAACA AATTCGTTTG
GCAGCAAGGG GTTCCAAGGC AATCTTCTGT GAGAAACCTG TGGATATGTC TGTGGACAAT
ATACGGAAAT TGGTTGATGT GACCGCCGAG GCCAGTGTTC CGTTCTTCAC AGCATTTAAC
CGCCGGTTTG ATCCGAACTT TGCCTCCCTC CAGACGCGTC TCTCAGCGGG AGAAATTGGT
GCGGTTGAAC TGATCCAAAT TACCTCGCGC GACCCCTCGC CCCCGCCAAT CGGCTATATC
AAGACTTCTG GCGGGTTGTT CCGGGACATG ATGATCCATG ATTTCGACAT GGCTCGGTTT
CTGATGGGGG AGGAATTTAC GACCCTCTCC GCCGTAGGGT CCTGCCTTGT GAACCCTGAG
ATCGGAGAGG CCGGTGACGT GGATACGGCC GCTGTTACGT TGACCACCGC GTCTGGGCGG
ATCTGCCAGA TCTCCAATTC GCGGCGCGCG AGTTATGGTT ACGACCAGCG GATCGAGGTG
CATGGGTCAA AGGGTATGCT GCGAGCCGAG AATATTCTGG AGACGTCGGT GGAAATCGCC
ACGGCGGACG GCTTCCAGCG CGCGCCGACG ATGAACTTCT TCCTGGAACG CTATGAGGCC
GCTTATACCG CTGAAATGAA AGCATTTACC GACTGCGTCT TGACCGGCAC CAAGCCGACC
CCATCGATTG AAGATGGATT GCAGGCGCAG ATCCTGGCGG ATGCGGCGAC GCTATCCCAA
CAGACCGGAC AGCCTGTCGC GCTCTAG
 
Protein sequence
MLRIGLLGCG RIGQVHGRTI KALDNARVVA VADAVPAAAS ALASMLGADV RAAEEVLSAT 
DIDAVVIGTP TSIHFEQIRL AARGSKAIFC EKPVDMSVDN IRKLVDVTAE ASVPFFTAFN
RRFDPNFASL QTRLSAGEIG AVELIQITSR DPSPPPIGYI KTSGGLFRDM MIHDFDMARF
LMGEEFTTLS AVGSCLVNPE IGEAGDVDTA AVTLTTASGR ICQISNSRRA SYGYDQRIEV
HGSKGMLRAE NILETSVEIA TADGFQRAPT MNFFLERYEA AYTAEMKAFT DCVLTGTKPT
PSIEDGLQAQ ILADAATLSQ QTGQPVAL