| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1411 |
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| Symbol | |
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| ID | 3933858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1380683 |
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| End bp | 1381666 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903761 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_509353 |
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| Protein GI | 89053902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.134914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.071532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA CTCACATCGC GGTCTGCATG GCCGCCGCAT CCGTGGCATT CCCCGCCATG
GCCGAAACCT GGGATATGCC GATGGCCTAT TCAGGGTCCA ACTTCCATTC GGTCACGGGC
GCGGAGTTCG CCCAATGCGT CACGACCGGC ACCGGCGGCG AGATTGAGAT TACCACCCAC
CCGGGCGGAT CGCTGTTTGC GGGTGCGGAC ATCAAGCGTG CGATCCAGAC CGGTCAGGTT
CAGATCGGGG AGCGTCTGCT GTCCGGCCAT CAGAACGAAG ACGCGCTGTT CGGGTTTGAT
AGCATCCCGT TCCTGGTGGG GTCGTTCGAT GAGCATGACC TGCTGTGGCA GGCGGCCGAA
GGCCCGATCC GGGAGCTTCT GGAAGGCCAG AACCTACACC TGATCTATTC CGTGCCATGG
CCGCCCCAGG GCCTCTACTT CAATCAGGAA GTGACCTCTG TGGCCGATAT GGAAGGCATC
CGCTTCCGGT CCTACAACAA CGCGACCAAC CGTCTGGCCG AGTTGACGGG GATGCTGCCC
GTGACGATCG AGGCGGCAGA GATCAGCCAA GCCTTCGCCA CGGGTGTTGC GTCGTCGATG
GTGTCGTCCG GTGCCACGGG CTACGACCGC CGCGTCTGGG AAAGCCTGAG CCACTTCTAT
GAGGTCGACG CCTGGTTGCC GCGCAACTAC ATCATGGTGA ACGGTGACAC CTGGGCGGCC
ACATCCGAGG CCAACCAGAA CGTCATCAAC GCCTGCGCCG AACTGGCCGA ATATGCAGGC
ACATGGCGCG CACGGGAATA TACCGGCTTC ACGCTGGCGG GCCTCGCTGC CGGTGGCATG
ACCGTTGAGC CCGCCGGTGA CGCGCTGATG GAAGAGCTGC GTGCCATTGG CGAGACGATG
ACCGCTGAAT GGCTGGAGGC CGCTGGCGAA GAAGGCCAGG CCATCATCGA CGCCTTCCGT
GAGGCTGCCG CCGCTGCGGA GTAA
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| Protein sequence | MKFTHIAVCM AAASVAFPAM AETWDMPMAY SGSNFHSVTG AEFAQCVTTG TGGEIEITTH
PGGSLFAGAD IKRAIQTGQV QIGERLLSGH QNEDALFGFD SIPFLVGSFD EHDLLWQAAE
GPIRELLEGQ NLHLIYSVPW PPQGLYFNQE VTSVADMEGI RFRSYNNATN RLAELTGMLP
VTIEAAEISQ AFATGVASSM VSSGATGYDR RVWESLSHFY EVDAWLPRNY IMVNGDTWAA
TSEANQNVIN ACAELAEYAG TWRAREYTGF TLAGLAAGGM TVEPAGDALM EELRAIGETM
TAEWLEAAGE EGQAIIDAFR EAAAAAE
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