| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1406 |
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| Symbol | |
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| ID | 3933853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1374880 |
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| End bp | 1376571 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903756 |
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| Product | acetolactate synthase, large subunit |
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| Protein accession | YP_509348 |
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| Protein GI | 89053897 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0875131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATC AGATGAACGG GGCGGACGCG CTGGTTGGTA TGCTCAAGGC CCATGGCGTG
CGGCATATCT TCGGCCTTTG TGGCGATACC TCGCTGCCGT TCTACGATTC CATGCGCGCC
CATGGCGGTA ACATCACCCA TGTGCTGACC CGCGATGAGC GCTCCGCCAC TTACATGGCG
GACGGTTATT CCCGCGTCAC AGGCCGCCCC GGCGTGGCGG AAGGGCCGTC GGGCGGCGGC
GCGACCTACA TCCTTCCCGG CCTGATCGAA GCGTCGGAAT CCTCCTACGC CGTCCTTGGC
ATCACAACGG ATATCAGCGT CGGCACCTAC GGCAAATACC CCCTGACGGA GGTGGATCAA
AACGCGCTGA TGGCGCCCGT GACCAAATGG AACAGCGTCA TCGTCCAGGC GGCCCACATC
CCCCGCATGG TGCGCAAGGC GTTCCGTGCC ATGACAACCG GGCGCGCGGG CGCGGCGCAT
CTGGGGCTGC CCTACGACAT CCAGTATGAC CCCGTGGACT CCAGTGATAT CTGGGCCGAT
CCCAAACACG CGACGTACCC GGCCTATCCC CAGGCGCCCG AGCCCGGCGC GGCGGAGGCA
GCGGTGGACG CGATCTTAAG CGCAAAGAAT CCGCTCATCG TCTGCGGCGG CGGCGTGGTG
ATCGCAGGCG CGATGGAGGA GCTTGCGCGT CTGGCAAACC GCCTCGACAT CCCCGTCGCG
ACGTCGATCA GCGGGCAGGG GAGCCTGGCG GATACGGACC CGATGTCCCT TGGCGTCGTG
GGCTCCAACG GTGGCACGGA TGAGACGTGG GAAGCGATGG AGGCCGCCGA CCTGGTGATT
TTTATGGGCG CGCGGGCAGG CTCCACCACC ACGGCCCGGT GGGAGGCCCC GAAACCCGGC
GCGCGCGTGG TGCATTTTGA CAGCGACCCA ATGGTGATCG GTGCGAATTA CCCGACGGAG
GTGGGCGTCG TGGGCGATCT GCGCCTCTCA CTCCAGGCCG TGAACGCGGT CTTGGACGCG
CGCGGACAGG GAGCCACGAC GTTCGGCGGC GCGCAAGCTG TCGCTGACAT CAAGGCGCGC
AAATTCGCCC GCTTCAATGC CTTAGCAACC AGCGACGAGA CCCCGATCCG GCCGGAGCGC
GTCGTGGCCA CCCTCAACCG CATTCTGCCC GAAGATGCCA CCATCGTCTC GGACCCCGGC
ACATCCTGCC CGTATGTCTC GGCCTACTAC CAGCATGCAA AGGCTGGCCG CTTCTTCATC
ACCAATCGCG CCCACGGGGC ACTTGGCTAT TCGCTGTCGG CATCGCTCGG CGCGTGGTTC
GGGCGGCCCA CGTCAAAGGT CGTGGCGCTG ATGGGCGACG GGTCCTTCGG GTTCACCTGC
GGCGAGTTGG AGACGGTCAC GCGGGCGCGC GCAAACATCA CCTTCGTGGT GTTCTCCAAC
GCCAACTTCG GGTGGATCAA GGCCAGCCAG ATGGCCGACA AGGGATCGCG TTACTACAAC
GTGGATTTCA ACCGAGTGGA TCACGCCGCG GTGGCCAGTG CTTATGGCGT GAAGGCGTGG
CGGGTAGACG ACCCCGGCGC ATTGGAGGCG ACGCTAACGG AGGCGATTGA TCATGACGGT
CCGACCCTGG TGGACATCAT CGCGCAGCCA TTGGAAGAGG CGGCCGCCCC GGTGCGGCGT
TGGATGGGCT GA
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| Protein sequence | MDNQMNGADA LVGMLKAHGV RHIFGLCGDT SLPFYDSMRA HGGNITHVLT RDERSATYMA
DGYSRVTGRP GVAEGPSGGG ATYILPGLIE ASESSYAVLG ITTDISVGTY GKYPLTEVDQ
NALMAPVTKW NSVIVQAAHI PRMVRKAFRA MTTGRAGAAH LGLPYDIQYD PVDSSDIWAD
PKHATYPAYP QAPEPGAAEA AVDAILSAKN PLIVCGGGVV IAGAMEELAR LANRLDIPVA
TSISGQGSLA DTDPMSLGVV GSNGGTDETW EAMEAADLVI FMGARAGSTT TARWEAPKPG
ARVVHFDSDP MVIGANYPTE VGVVGDLRLS LQAVNAVLDA RGQGATTFGG AQAVADIKAR
KFARFNALAT SDETPIRPER VVATLNRILP EDATIVSDPG TSCPYVSAYY QHAKAGRFFI
TNRAHGALGY SLSASLGAWF GRPTSKVVAL MGDGSFGFTC GELETVTRAR ANITFVVFSN
ANFGWIKASQ MADKGSRYYN VDFNRVDHAA VASAYGVKAW RVDDPGALEA TLTEAIDHDG
PTLVDIIAQP LEEAAAPVRR WMG
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