| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1405 |
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| Symbol | |
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| ID | 3933852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1374132 |
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| End bp | 1374800 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903755 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_509347 |
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| Protein GI | 89053896 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0359865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGTA CACCGGAAAG CAACGTCGAC CGCCTGACTG CGCAATTGCG CCGGATGGCA
GCCGATTTCG AGATCAAACC CGAGGAGCGG ATCGTTGAGG GCGAGATGGC CAAGCGCCTT
GACGTCAGCC GCACACCGCT ACGGGAGGCG CTGAACCGGC TGGTGTCGGA GGGGTATCTG
ACCAACACCG GCGGACGTGG CTTCTTTTGT CGCGCGTTGA CGCCGGACCG GATCCTTGAC
CTCTACGAGA CCCGCGCCGC GCTGGAATGT GAGGCGCTTC GCCTGACCAT CGCACGGGCG
ACAGACGCCG ATATTGCGGG ACTTTCCGAG ACGTTGAACA GTGCCATGCT CAATGCGGAC
AGGCTTGAGC TGCTGGAGAT GGATGAAGCA TTCCACATTG GCCTTACGCA ACTGGCCGGC
AATGGGGAAC TCACGCGGCT GTTGGAAAAT ATCAATGGGC GCATCCGCTA TGTGCGGATG
ATCGGGCTGA ACGCGGGCGA TGGCGTATCG GCGCAATTGG CGGCTCATCG CAACATCTTG
CGGGCGGTTG AGGCGCGTGA TCTGGCGGGC GCACTGGCCG CCTTGCGTGC CCATATCGAG
CTGCGGAAAG AGGACGCCAC ACAGGCCGTC CGCACGGCAT TCTCCGAAAT CTACGTGCAG
GCGAGCTGA
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| Protein sequence | MDSTPESNVD RLTAQLRRMA ADFEIKPEER IVEGEMAKRL DVSRTPLREA LNRLVSEGYL
TNTGGRGFFC RALTPDRILD LYETRAALEC EALRLTIARA TDADIAGLSE TLNSAMLNAD
RLELLEMDEA FHIGLTQLAG NGELTRLLEN INGRIRYVRM IGLNAGDGVS AQLAAHRNIL
RAVEARDLAG ALAALRAHIE LRKEDATQAV RTAFSEIYVQ AS
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