| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1396 |
|---|
| Symbol | |
|---|
| ID | 3933843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1365694 |
|---|
| End bp | 1366971 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637903746 |
|---|
| Product | carbohydrate kinase, FGGY |
|---|
| Protein accession | YP_509338 |
|---|
| Protein GI | 89053887 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0326227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC TTTCGCTTGG GATCGACCTG GGCACATCGG GCATCCGCTC GGCTGTGGTG
AATGGCGCGG GAGAGGTCGT TTCTACCGCG CGTGGCACTT ACGGTCCACA AGACGCAGCC
GCGATTGACG CCACCGTCTG GTGGAATGGC GTGTTGGAGT GCTTAACCAA CCAGATCGCG
GCGTTGTGCC GGGATGATGT TGACCCGGCT CGGATCAAGC GGGTTGGTGT CGATGGCACA
TCCGGCAGCA TGGTTCTGAC GGATGCAGAC CTTGTGCCGG TTACGCGGGC GCTGATTTAC
AATTCGGACG GGTTCAAAGA GGAGGCCGCA CAGATCGCAA ACCTTGCCCC CGATCCGCAT
ATCACGCGCG GGACCTCCTC GGCTTTGGCG CGCGCGCTCA GGTTGCAGGC CGAAGATACG
GGGAATGCCG CGACCCACCT GTTGCATCAG GCGGATTTCA TAGGCGCGAA GCTGATGGGG
CAGGGCGGGG TGTCGGACCA TAACAATGCG CTGAAAACAG GGTATGACCC TGAGGCAGAG
GCGTGGCCAG ATTGGTACGA CGCGCTTGGC CTGCGGTTGG AGCTGTTGCC CAACGTCCTT
CCAGCGGGCG CGGCGGCGGG GCCGATTGCG GCAGATGTCG CGGCCCAATT CTCGTTGTCG
GCGAACGTGG TGGTTCATGT CGGCACGACC GACAGCATCG CCGCGTTTCT GGCTGCGGCC
CCGCTGCGCT TGGGAATGGC GGTCACGTCG CTTGGTACGA CACTGGCAAT CAAACTGCTC
AGCGCTAAGC GGATTGATGC ACCCGAAATC GGGCTTTATT CCCACAGGCT TGGCGATGGC
TGGCTGGTGG GCGGGGCGTC CAATACCGGC GGCGGCGCGT TGCTTCAGCA TTTCGATGCA
GAGCAGATGG TCGCATTGTC GGACAAGATC GACCCTGCCA CGCCGTCAGA ACTGGACTAT
TATCCCCTGG CTAAACCCGG CGAGCGGTTC CCCGTCAATG ACCCCCACCT TGCGCCACGC
ATGGGCCCTC GCCCCGCCGA TGACGTGGTC TATCTGCATG GATTGCTGGA GGGCATCGCC
CGGGTCGAGC GGCAATGCTA TGACGCCATG GTTGCGCGCG GCGCAGACTG GCCGGAGACG
GTGTTTACCG CCGGAGGCGG GGCGCGAAAT GCCACCTGGA CCAAGATCCG CGAGCGTGTG
CTTGGCATGC CGTTGACCTC CGCGCTTGAA GGGGAGGCGG CGGTTGGGAC CGCGCGGCTG
ATCCAGTCCA ATGCTTAA
|
|---|
| Protein sequence | MTDLSLGIDL GTSGIRSAVV NGAGEVVSTA RGTYGPQDAA AIDATVWWNG VLECLTNQIA
ALCRDDVDPA RIKRVGVDGT SGSMVLTDAD LVPVTRALIY NSDGFKEEAA QIANLAPDPH
ITRGTSSALA RALRLQAEDT GNAATHLLHQ ADFIGAKLMG QGGVSDHNNA LKTGYDPEAE
AWPDWYDALG LRLELLPNVL PAGAAAGPIA ADVAAQFSLS ANVVVHVGTT DSIAAFLAAA
PLRLGMAVTS LGTTLAIKLL SAKRIDAPEI GLYSHRLGDG WLVGGASNTG GGALLQHFDA
EQMVALSDKI DPATPSELDY YPLAKPGERF PVNDPHLAPR MGPRPADDVV YLHGLLEGIA
RVERQCYDAM VARGADWPET VFTAGGGARN ATWTKIRERV LGMPLTSALE GEAAVGTARL
IQSNA
|
|---|
| |