| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1394 |
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| Symbol | |
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| ID | 3933841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1363880 |
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| End bp | 1364716 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903744 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_509336 |
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| Protein GI | 89053885 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0305985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG TCATTGAAAG TTTGTCAGAA ATATCTGATC GGTTTGACGC AATCGTGCTG
GATCAATGGG GCGTGTTGCA TGATGGCACC TCGCCCTATC CAGGCGCGGT TGCCGCCTTG
GAGGCGCTGA ACACCCGGTT GGCGGTGTTG TCGAACTCTG GCAAACGGTC CGATCCTAAC
GCCAGGCGGA TCGCGGATAT GGGGTTTGAT GCGCGCTTGT TTGAGGTTGT GATGACGTCG
GGTGAGGCGC TGTGGCAGGA CATCGCCTCG GGGCGCGTCG GGCATTGTTC ACTGTGCCCA
ATCACCCGCG GCGCGGGGGA TGCGGAGACT TGGGCAGAGG GGCTTGGCGT GACGCTGACC
CAAAATCCGA CGCAGGCCGA TGCGATCCTG CTGATGGGCC TGCCGGATGA CGGCCCGGGG
GCCGCGGAGG ACGTTCTAGA AATTGCACGT GCCAAAGGCA TCCCTTTGCT GTGCACCAAC
CCGGACCGCG CATCGCCCCG CGCTGGCGGC GCTACGGTTG TCTCACCGGG CGCGCTGGCC
CATGCCTATC AGGATGCCGG CGGCGAGGTT GAGTTTTACG GCAAGCCCCA TGGTCCGGTG
TTCGATGCGG TGGCCCATGC CTTGGGTGCC GAGCCAGAGC GTTTGCTGAT GGTCGGTGAT
AGTCTTGAAC ATGACATCGC CGGAGGTCAT GGCGCTGGAT GGGCGACCTT GTTCATTCGC
GGCGGTTTGC ACGCAGGGGC CTTTGCGGAT GGCGCTGACA CTACACAGAC CATCGCCGAT
CTTGCCGCCC TTGATGGCGC GCCGCTGCCC ACCTATACCC TTGACCAATT GAGATAA
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| Protein sequence | MTQVIESLSE ISDRFDAIVL DQWGVLHDGT SPYPGAVAAL EALNTRLAVL SNSGKRSDPN
ARRIADMGFD ARLFEVVMTS GEALWQDIAS GRVGHCSLCP ITRGAGDAET WAEGLGVTLT
QNPTQADAIL LMGLPDDGPG AAEDVLEIAR AKGIPLLCTN PDRASPRAGG ATVVSPGALA
HAYQDAGGEV EFYGKPHGPV FDAVAHALGA EPERLLMVGD SLEHDIAGGH GAGWATLFIR
GGLHAGAFAD GADTTQTIAD LAALDGAPLP TYTLDQLR
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