Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1393 |
Symbol | |
ID | 3933840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1362947 |
End bp | 1363873 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637903743 |
Product | beta-lactamase-like |
Protein accession | YP_509335 |
Protein GI | 89053884 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.363509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.105082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTAC AAGAGACCAA GATTTACCCT ATCAATACCG GTTGGCTTGA AGCTGATCTT GGCACGTACA TCTTCTGGAA GGGCCCCGCG GGTCAAAAAA TCTGGAACCC GGTCTATTGC CATTACGTGG ACACCGGCAC CCACAAGATC CTGATCGACA CGGGCCTGTG CGATGAAGAG CGCGCCACCA AGTACCACCA TAAATGCGAC AAGCGCGGCT GCCTTCAGGT TCATGAACAT CTGGAGCAGA AGCTTGGCGT GCACCCCGAT GAGATCGACG CCGTCGTCTT TACGCATTTG CACTGGGATC ACGTGCAGAA CATGAAGGAA TTCAAGAACG CCCGTTACAT CGCGCCGAAG GCTGAGATCG AAATGGCGTT CAATCCGCTG CCGCTCTACT ACCGCACCTA CGAGTCCGGA TATCTGGGGA TCGAGCCTGC CTACACCGGC TGTGTGTTCG AGGCTGTGGA GGACGAATGC GAAGTTCTGC CCGGCATCAC CATGTTCCAC ACGCCCGGCC ATTCGGTCGG CCACATGGCG GTGACGGTCG CGACGTCTGC GGGGGATATC GTCGTCGCCG GCGACGCCAT CTTCCAGGAG CGCAACATGG AGCCGAACGA GGCGGAGGGC TGGCGCTACT GGGTGCCCGC GCGGTTCGTG AACTCCTACG AGGGGTGGAA ATCAGTCGAG GAACTCGACA AGCGCGCCGA CTATATCCTT GCGTGCCACG ACAAGGTGGC CAATGCGCGG TCCAATGTGT TCCCCTATGA GGGCATGCCG ATCCGCAAGC GCCGCCAGCA CATTCCGGGC TTCAAGTTCT ACTTCGGTGA TATGCCCGCC GGAGCCACCG ATAAGGCGGC ACCTGCGCTG ACAGCAGATG AGGCGAAGGA GTATCTCGCG AACCTCGTGC CGCCGACCCC GGACTGA
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Protein sequence | MGVQETKIYP INTGWLEADL GTYIFWKGPA GQKIWNPVYC HYVDTGTHKI LIDTGLCDEE RATKYHHKCD KRGCLQVHEH LEQKLGVHPD EIDAVVFTHL HWDHVQNMKE FKNARYIAPK AEIEMAFNPL PLYYRTYESG YLGIEPAYTG CVFEAVEDEC EVLPGITMFH TPGHSVGHMA VTVATSAGDI VVAGDAIFQE RNMEPNEAEG WRYWVPARFV NSYEGWKSVE ELDKRADYIL ACHDKVANAR SNVFPYEGMP IRKRRQHIPG FKFYFGDMPA GATDKAAPAL TADEAKEYLA NLVPPTPD
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