| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1388 |
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| Symbol | |
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| ID | 3933835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1357630 |
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| End bp | 1358565 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903738 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509330 |
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| Protein GI | 89053879 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0143225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0966984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA CGAATTACGA GCGTCAGAAC CCCGCCTATT ACGTGCTGAT CGCGATTCTG
ATCTTTATGT CCATCGGCCC GGTCATCCTG CTGCTGACCA ACTCGCTGAA GCTGGATGTG
GATATCACCA GCGGCGCGGG CGGGCTGCTG TTCATGCCGA CGATCCGCAA CTATGAGACG
GCGCTGTGCG ATATCCTGTG GTACGAGCCC GACCACCTGC GCTTCTGCAC AATCCGCTTC
GGCGGGGCCT TCATCAACTC GCTGATTATT GCCCTGATCT CCACAGCATT GACGCTGGTA
TTTGGCTGCA TGGCCGCCTA TGCGCTGGTC CGCTTCAAAT TCATGGGCCG CGATACGGCG
TCTTTGTCGA CCCTCGCTGT TCGCATGATC CCCCCCGCCG TCTTGCTGGT CCCGGTCTTT
GCGCTGTGGA ATAACGCCTT CTGCCTCGAC AACGATTATG GCCTTGGCAT GTGGATCCGC
GACACCTTCG GGGGGCGCGG GGACGTTTGC CTTGCGGGCA CGCATTCGGG CATCATTATT
GTCTACGTCG CGATGAACCT GCCATTTGTG ATCTGGATTC TGCAAAGCTT CATCGTCCAA
GTCCCCCGCA GCTTGGAAGA GGCGGCCCGC GTCGATGGCG CGGGACCGTT CCAGGTGTTC
TTCCTAGTCG TGCTGCCGCT GATCAAACCC GGCCTTGCCG CGGCATCGAT CTTCACCTTC
CGTATTGCCT GGAATGAATA CCTTCTGGCC TCAGCCCTCG CAGATCGCGA TACCATGACT
GTGCCGATCC TGATCGTGAA CAATGCCTCT GAATTTGATG GATTGGGCAC GATCATGGCC
ACGGGGATGT TGTTGGCGAT CCCACCGATC CTGTTCACGT TGTTCGCTTC GCGCCAGATC
ATCACCGGAA TGACGGCAGG GGCCGTGAAA GGGTAG
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| Protein sequence | MADTNYERQN PAYYVLIAIL IFMSIGPVIL LLTNSLKLDV DITSGAGGLL FMPTIRNYET
ALCDILWYEP DHLRFCTIRF GGAFINSLII ALISTALTLV FGCMAAYALV RFKFMGRDTA
SLSTLAVRMI PPAVLLVPVF ALWNNAFCLD NDYGLGMWIR DTFGGRGDVC LAGTHSGIII
VYVAMNLPFV IWILQSFIVQ VPRSLEEAAR VDGAGPFQVF FLVVLPLIKP GLAAASIFTF
RIAWNEYLLA SALADRDTMT VPILIVNNAS EFDGLGTIMA TGMLLAIPPI LFTLFASRQI
ITGMTAGAVK G
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