| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1383 |
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| Symbol | |
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| ID | 3933830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1352958 |
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| End bp | 1354157 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903733 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_509325 |
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| Protein GI | 89053874 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.105082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGGTC TCACGAAAAC CGACGCCCGT CTGTATCTGA TCGTCATCGG CATGCTGGTG
TTCGCACCGT TTCTTCTGAA CCCCTTTCCC GAGACCTCGG GGCTGGCGCA GTTCAATGCG
GGCTATCCCG ATCTGATGCA AAAGCTGGTG ATCTTCGGTA TCTTTGCAGT GGGTTACAAC
ATCCTCTTCG GGCTGACCGG GTATCTGTCA TTCGGCCACG CCGCCTTCTT GGGCATCGGC
TCCTTTGCGG GCGTTTGGGT CATGAAGCTG CTGACGATGA ACGTTATTCC GGCGTTGATC
ATCGCGATGC TGGTGGCCGG GGTGTTCGCC CTGGTGATCG GTTTCGTCTC GCTGCGGCGG
TCCGGCATCT ACTTCTCGAT CCTGACCCTG GCTTTTGCGC AGATGTGCTA CAGCCTCGCC
TATTCCGTTC TGACGCCGAT CACCGGCGGT GAGACCGGTC TGACCCTTTC CCTTGACGAT
CCGCGCATTC TGGGGGTCAG CCAGACGGAA AGCGGCAACA TTCCGGTGCC GCATCTCTTT
GGGTTGGATA TGGCCTCGGC CACCACGATT GACGTGGGCG CATGGAACTT CACATTCAGT
GCGGGCTACT ACTTTGCCGC GCTGATCATG GCGTTTGCCT TCTACTTCTC GATCCGGCTG
TTCCGCTCGC CCTTTGGCCT GATGCTGAGG GCGATCAAAT CAAACCAGAC CCGAATGAGC
TACACGGGCC TGAACCCGCG CCCCTATACG TTGGCGGCGT TCGTCATTTC CGGCATGTAT
GCGGGGCTTG CAGGCGGCCT AATGGTGGCG ATGGATCCCC TGGCCGGGTC CGAACGGATG
CTCTGGACCG CCTCCGGTGA GGTTGTCCTG ATGACGATCC TCGGCGGGGC AGGGACCCTG
ATCGGCCCGA TCCTGGGCGC CGGTGTCATC GCCTATCTGG AATCGATTAT CTCCACCATC
GGCTCCACCG TTCTCTACAA CTGGTTCTCG GGCCTTCCCG ACGGCATCGC CAACGTTCTG
GTCAACGTGA TCTATCCCTT CGTGGGCTCT GGCTGGCACC TGACGCTGGG TCTTGTGTTC
ATGCTGGTTG TGATCTTCCT GCCCGGCGGC ATCGTCGAAG GGGGAAAGCG CATCGGCGGC
CTCTTCCGTC GCAGACAGGA CAAGACGTCT GCAACCACCA CAGCCGAGCC TGGCGAATAG
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| Protein sequence | MLGLTKTDAR LYLIVIGMLV FAPFLLNPFP ETSGLAQFNA GYPDLMQKLV IFGIFAVGYN
ILFGLTGYLS FGHAAFLGIG SFAGVWVMKL LTMNVIPALI IAMLVAGVFA LVIGFVSLRR
SGIYFSILTL AFAQMCYSLA YSVLTPITGG ETGLTLSLDD PRILGVSQTE SGNIPVPHLF
GLDMASATTI DVGAWNFTFS AGYYFAALIM AFAFYFSIRL FRSPFGLMLR AIKSNQTRMS
YTGLNPRPYT LAAFVISGMY AGLAGGLMVA MDPLAGSERM LWTASGEVVL MTILGGAGTL
IGPILGAGVI AYLESIISTI GSTVLYNWFS GLPDGIANVL VNVIYPFVGS GWHLTLGLVF
MLVVIFLPGG IVEGGKRIGG LFRRRQDKTS ATTTAEPGE
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