| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1382 |
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| Symbol | |
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| ID | 3933829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1351923 |
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| End bp | 1352954 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903732 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_509324 |
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| Protein GI | 89053873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0563263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA TCATCCTCCA AGTTCTCAAC GGCCTGGACA AAGGGTCCGC CTACGCGCTG
ATCGCGCTGG GTCTGACCTT GATTTTCGGC ACGCTCGGCG TCGTCAACTT CGCGCATGGG
GCGCTGTTCA TGTTGGGGGC GTTCATCGCC GTGACCCTGC GGCGTGTCCT GAACCTGTCA
TTTGAAACCA TCGACGAGAC GCGAACCGAC TTTCTGGGCA ATCCGATGGC GGTCGACACG
CCTTATGTGG AGTATTGGTT TGGCCCGGAG ATGGGCAGCG CGATCATCGA CTGGTCCGTT
CCCATCGCCG TCCTGCTCGC CATTCCGATC ATGGCGCTGA TCGGTGTCGC GATGGAGCGC
GGCCTGATCA AACATTTCTA CAAGCGCCCC CACGCCGATC AGATCCTCGT GACGTTCGGC
CTCGCTATTG TTCTGCAAGA GATCATCAAG GCCTTCTACG GCGCGAACCC CATTCCCACG
CCCGCGCCGC AAGCCTTTGT TGGGTCCTTC GATTTCGGCG CGTTGATCGG GTTCGATCCC
TTCACAATCA TGTACCCCTA TTGGCGTCTG GTCTATTTCG CCTTCTCGAT GGTGATCATC
GGTGCGGTCT TTGCCTTCCT GCGCTTCACG ACCTTTGGAA TGGTGGTGCG GGCGGGCATG
GCCGACCGGG AGACAGTGGG CCTTCTGGGC ATCGACATCG ACCGGCGGTT TGTCATCATG
TTCGCGATCG CCGCAATCGT CGCGGGACTG GCGGGTGTCA TGTACACGCC GATCCTGTCG
CCCAACTATC ATATCGGCAT GGAATTCCTG GTGTTGAGCT TCGTGGTCGT CGTTGTGGGC
GGCATGGGAT CTCTGCCCGG CGCCGTCGCT GCCGGGTTCC TGCTGGGTAT CCTGCAAAGC
TTCGCGTCGA TGTCGCAAAT CATCGAGATC ATCCCCGGCA TCAACCAGGT CATCATTTAC
CTTGTTGCCG TCATCGTTTT GTTGACCCGT CCCCGCGGCC TGATGGGCCG CAAAGGCGTG
ATGGAGGAAT AA
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| Protein sequence | MEAIILQVLN GLDKGSAYAL IALGLTLIFG TLGVVNFAHG ALFMLGAFIA VTLRRVLNLS
FETIDETRTD FLGNPMAVDT PYVEYWFGPE MGSAIIDWSV PIAVLLAIPI MALIGVAMER
GLIKHFYKRP HADQILVTFG LAIVLQEIIK AFYGANPIPT PAPQAFVGSF DFGALIGFDP
FTIMYPYWRL VYFAFSMVII GAVFAFLRFT TFGMVVRAGM ADRETVGLLG IDIDRRFVIM
FAIAAIVAGL AGVMYTPILS PNYHIGMEFL VLSFVVVVVG GMGSLPGAVA AGFLLGILQS
FASMSQIIEI IPGINQVIIY LVAVIVLLTR PRGLMGRKGV MEE
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