| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1380 |
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| Symbol | |
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| ID | 3933827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1349485 |
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| End bp | 1350159 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903730 |
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| Product | hypothetical protein |
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| Protein accession | YP_509322 |
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| Protein GI | 89053871 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.147375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCT GGATACATCT GGCGACCGCA GCCACGCCGG AGGGCGATCT TTTGCGGCTG
TCGCGCCGGG GGGTGGAGTA TTCGATCCGG CTTGAGGGCG GAAATGAGCT GATGAATTCG
CGCCTTGGTG GCTCGGAGGA GGCATTGGCC ACGCTGGCAT TCGATCATTT GGCTCATAGG
TCCGCCCCCC GGGTGTTGAT CGGCGGTTTG GGCATGGGGT TCACCCTACG CGCGGCCCAG
GACAGAGCCC CCGATGCCGC GCAACTGATT GTGGCCGAGA TCGTTCCCGA GCTTGTTTTG
TGGGCGCGTG AGCATATGGG CCCCGTCTTT GGTACGTGTC TTGAAGATCC AAGGGTCAGC
ATCACGACAG GGGATGTCGC GACCCTGATC CGCGATGCCA CAACACCATT CGACGCGATC
TTATTGGACG TCGACAATGG TCCCGACGGG CTGACGCGGA CGGAGAATGA CGCGCTGTAT
TCCGTCGCAG GGCTGAAGAC CGCGCGGCAG GCTTTGCGCG CAGGCGGCGT ACTGGCCGTT
TGGTCGGCCC ATCCCGACGC GGCCTTTACC AAGCGTTTGG CGCTGTGCGG ATACGACGTG
ACCACGCATA ACGTGCGCGC CAGTCGGGCA AAACGGGGCA GTCGCCACAC GATCTGGATC
GCGCGCGCGG GTTAG
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| Protein sequence | MQPWIHLATA ATPEGDLLRL SRRGVEYSIR LEGGNELMNS RLGGSEEALA TLAFDHLAHR
SAPRVLIGGL GMGFTLRAAQ DRAPDAAQLI VAEIVPELVL WAREHMGPVF GTCLEDPRVS
ITTGDVATLI RDATTPFDAI LLDVDNGPDG LTRTENDALY SVAGLKTARQ ALRAGGVLAV
WSAHPDAAFT KRLALCGYDV TTHNVRASRA KRGSRHTIWI ARAG
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