| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1379 |
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| Symbol | |
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| ID | 3933826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1347982 |
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| End bp | 1349340 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903729 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_509321 |
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| Protein GI | 89053870 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.170039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTGGA AGGCCAAGCA CCCCGTCGAA CCGAGTAAGG TCGACGACGT CACAGAGACA
TTTATCGCCA TCATCGACCG CACGCAGGCC ACCATTCAAT TTGAACTGGA CGGGACAATC
ATCGACGCCA ATGCCAATCT GCTGCGCGCC ACGGGCTACA CACTGGACGA GCTTGTCGGC
AAACACCATT CAATGTTCGT CGATCCCGGT TTCGCAAAGA CCCCCGCATA TGCACAGTTC
TGGGAGCGTC TGGGGCAGGG AGAGATTCTC GATGACATCT ACCCCCGGAT CGCAAAAGAC
GGATCGACTG TCTGGATGCA GGCCGCATAC GCCCCGGTAT TCGCAGCCGA TGGCACGCCG
ACGCGCGTGA TCAAGATTGC CACGGACATC ACCGATCGTC AGAGCGATAT TGCCGAGATC
GCGGTGGGTC TGGAAGAGAT GAGTAATAAG ACCCTCTCGC ACCGGATCGC CGTCTCCAAA
CACAACGATC TGGCGAAACT TGGGACAGCA TTCAATCTGG CCCAGGAACA GTTGAGTTCG
GCCCTGGACA TTGCCAAAGA CGTCTCGTCG GGGGTGGAAC AGACTGCGGA TGACCTCAGC
CAGGCCTCCG GTGCACTTGC GCAACGCACG GAAACGCAAG CCGCCACCCT GGAAGAGACA
GCCGCCGCCC TGGAAGAGAT GTCGGCAACG GTACAGGCCA CGGTCGGCAG CACCAAGGAT
GTGGAGCGGG CCGCGAAGGC GGCGACCGCC ACCGCCGAGA CCGGCGGCAA AGTCGTGGAT
AATGCGGTCA ACGCCATGTC GCTCATCGAG AAATCGTCCC ATGACATCGC GCGCATTATC
TCGGTGATGG AGGAGATTGC CTTTCAAACT AATCTCCTCG CGTTGAATGC CGGCGTGGAA
GCCGCGCGCG CCGGCGACGC GGGACGCGGG TTTGCGGTCG TCGCGTCAGA GGTGCGGGCT
CTGGCGCAAC GGGCGTCAGA ATCCGCCGGT GAAATCAAGA CGCTGATCTC CGGGAGTTCC
GAGCATGTGG CCAGTGGTGT CGAACTGGTC GGGCGTGCTG GGAAAGAACT GTCCAACATC
ATTTCAAGCG TCTCCCAGAT CTCGTCCAAT ATCAGCGATA TTGCCAACAC GACGACCGAA
CAGGCCACCG CTCTGACAGA GATCAACACC GGCCTGTCGC AACTGGATCA GGTGACCCAG
CAAAACACGG CCATGGTCGC TGAAACCTCG GCGGCGGGGC AGACGTTGGC CAAGGATGCC
AAACATTTGA CAGAGGTTCT ATCGGATTTT CAGACACATA TCGACGGCTA CGCGGCACCA
CAGATCTCCA TGGACAGCCC CGAAAGGCTA AGCGCATAG
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| Protein sequence | MFWKAKHPVE PSKVDDVTET FIAIIDRTQA TIQFELDGTI IDANANLLRA TGYTLDELVG
KHHSMFVDPG FAKTPAYAQF WERLGQGEIL DDIYPRIAKD GSTVWMQAAY APVFAADGTP
TRVIKIATDI TDRQSDIAEI AVGLEEMSNK TLSHRIAVSK HNDLAKLGTA FNLAQEQLSS
ALDIAKDVSS GVEQTADDLS QASGALAQRT ETQAATLEET AAALEEMSAT VQATVGSTKD
VERAAKAATA TAETGGKVVD NAVNAMSLIE KSSHDIARII SVMEEIAFQT NLLALNAGVE
AARAGDAGRG FAVVASEVRA LAQRASESAG EIKTLISGSS EHVASGVELV GRAGKELSNI
ISSVSQISSN ISDIANTTTE QATALTEINT GLSQLDQVTQ QNTAMVAETS AAGQTLAKDA
KHLTEVLSDF QTHIDGYAAP QISMDSPERL SA
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