| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1373 |
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| Symbol | |
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| ID | 3933820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1341918 |
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| End bp | 1342946 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903723 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_509315 |
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| Protein GI | 89053864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.507324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.253878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAT CAACCAAGAC GGCCTTGATG GGCGGCGCAA TTGCATTGGC AAGTTCTGGC
GCGGCATTCG CCGATGCCCA TGGCACGTCC GCATGCCTGA TCACCAAAAC CGACACCAAC
CCGTTTTTCG TGATGATGCG CGAAGGTGCG ACGGCAGCGG CGGAAGAGCT TGGCATCACG
CTCAACGCCT ATGCCGGTGA GGTCGACGGT GACCATGAAA CGCAAGTGGC CGCGATTGAG
ACCTGCATTG CCAACGGCGC GTCGGGCATC CTGATCACCG CCTCTGACAC GTCCTCCATC
GTGTCTGCGG TTGAGCAGGC GCGCGAAGCT GGCCTTCTGG TCATCGCGCT CGATACGCCG
CTTGATCCGA TTGACGCAGC CGACGCGACC TTCGCGACGG ACAATTTTGA AGCGGGCCGC
CTGATCGGGG CCTGGGCCGC CGCCTCCCTG GGTGACGCCG CCGCTGATGC CCGTATCGCG
ATGCTGGACC TGGCCGTCAG CCAGCCCACC GTGGGCGTGC TGCGGGATCA GGGTTTCCTG
GAAGGGTTTG GCATCGACAT CGGCGACCCA AGCCGTTGGG GGGATGAGGA CGACCCCCGT
ATCGTCGGCA ACGCCGTCAC TGCGGGTAAC GAAGAAGGCG GTCGCCGCGC CATGGAGGAG
CTTCTGGCCC TCGATCCGAT GATCAACGTG GTCTACACGA TCAATGAGCC TGCCGCGGCC
GGCGCGTATG AGGCTCTGCG GGCCATCGGT CGTGAAAACG ACGTGATGAT CGTCTCGGTG
GATGGCGGTT GCCCCGGCGT GCAGAACATC GCCGACGGCG TCATTGGCGC GACGTCGCAG
CAATATCCGC TGTTGATGGC GTCCCTCGGG ATTGAGGCGA TCGCCCAGTT CGCCGCTGAC
GGCACCGTGC CGCAACCCAC GGACGGGCTT GATTTCTTCA ATACCGGTGT GGCGCTGGTC
ACCGATCAGC CCGCTGACGG TGTGGACTCC ATCTCGGTGG CGGAAGGTCT TGACCTCTGC
TGGGGCTAA
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| Protein sequence | MRKSTKTALM GGAIALASSG AAFADAHGTS ACLITKTDTN PFFVMMREGA TAAAEELGIT
LNAYAGEVDG DHETQVAAIE TCIANGASGI LITASDTSSI VSAVEQAREA GLLVIALDTP
LDPIDAADAT FATDNFEAGR LIGAWAAASL GDAAADARIA MLDLAVSQPT VGVLRDQGFL
EGFGIDIGDP SRWGDEDDPR IVGNAVTAGN EEGGRRAMEE LLALDPMINV VYTINEPAAA
GAYEALRAIG RENDVMIVSV DGGCPGVQNI ADGVIGATSQ QYPLLMASLG IEAIAQFAAD
GTVPQPTDGL DFFNTGVALV TDQPADGVDS ISVAEGLDLC WG
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