Gene Jann_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1369 
Symbol 
ID3933816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1336859 
End bp1338412 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content64% 
IMG OID637903719 
Producthypothetical protein 
Protein accessionYP_509311 
Protein GI89053860 
COG category[C] Energy production and conversion 
COG ID[COG3488] Predicted thiol oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.646546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGC GCATGTTTTT TGCCGCCCCA ATCGCGGCGG CCTTTCTCCT TCCTGCGATC 
ATCGTCGCTC AATCGCCCGA GCCTCCTGCC TGGGCCGGTC TGGAGGATCT GCATCTTGAT
GTGATCCCAC GCACGGAAGA CGAGCGCGCA CGCATCGCGG CGGTCACCGC CCTGCCCACC
GATCTGTCCG CTCCCTTCGC GTTTGAGGAG AACTCGGGCG GTGCCGCCAC GGTGCGGCCC
CGCATGAATG CTGATGCGTT TTCCCAGCCG TCCGGCAATC TCAGCTTTGA AGATCAGCTC
AATTTCCGTG TTGGCAATGG GCTGTTCCGG CGATTGTGGG TTTCGCCGCC GGCCTCCACA
CTGGCCTCTG ACGGGCTGGG GCCGCTCTAC AATGCCCGGT CGTGTCAGCG GTGCCATTTG
AAGGACGGGC GCGGGCATCC GCCGGAAAGC CCAGACGATA GCGCCGTGTC GATGTTCCTG
CGCATCTCCA TCCCCGGGCC TGAGGACTTC GATGCCAGCG CGATCGAAGG ATATTTCGCG
ACACTGCCGG ACCCAACCTA CGGCACGCAG TTGCAGGATT TCAGCTTGCT CGGGCATAAC
GCCGAATACG CGCTTGGTGT TGAGTATGAC GAGATCGAAG TGCCGCTGTC CGGCGGCGAG
GTGGCGATGC TGCGCGCTCC CACCTACACG GCGGACGATC TCGGCTATGG CCCGCTTCAT
CCTGACGCCA TGCTCAGCCC CCGGGTTGCG CCGCAAATGA TTGGCCTGGG TCTGCTGGAG
GCTATTCCGG CGCAAGACAT CCTCGCCTGG GCCGACCCCG ATGATCTGGA CGGGGATGGC
ATTTCGGGCC GCCCGAACAT CGTCTGGTCT ATCGTCCATG ATGCGCCGAT GCTGGGGCGC
TTCGGCCTGA AGGCGGGCAA TCCAACGGTG CTGGAACAAT CCGCCGGGGC CTTTGCCGGA
GACATTGGCA TCTCTAGCCC TCTGCATCCG AACGGCTGGG GCGAATGTAC GAATGTGCAG
GCGACCTGCC GCGATGCGAT CCACGGCGGG GACCCCGAAC AGGACGGGTT TGAGATTGAC
CAGATCGGCC TCGACCTGGT GACGTTCTAT AGCCAAAACC TCGCCGTTCC GGCCCGGCGG
GATGTGGATG ACCCGGAGGT CCTGCGGGGT CGTGAGGTGT TTTACGAGAC CAACTGTACC
GGCTGCCATC GCCCGAATTA CGTCACCAAC CGCATCGAAG GCGACCCGGC GCAGAGTTTC
CAGCTGATCT GGCCCTATAC AGACATGCTG TTGCACGACA TGGGCGACGG TTTGGCGGAT
CACCGGCCTG AGGCGCGGGC CTCCGGCGAC GAATGGCGCA CCCCGCCGCT GTGGGGGATC
GGCCTGACGG AGCAGGTCTC GGGCCACACG TATTTCTTGC ACGACGGGCG CGCGCGCAGC
CTTCTGGAGG CGGTGTTGTG GCACGGGGGT GAGGCGCAAA CCCAGCGGGA TGCCGTTGTC
GCCATGCCGC CAGAGGATCG GGCTGCCCTG ATCCGCTTTT TGGAGAGCCT TTAG
 
Protein sequence
MTPRMFFAAP IAAAFLLPAI IVAQSPEPPA WAGLEDLHLD VIPRTEDERA RIAAVTALPT 
DLSAPFAFEE NSGGAATVRP RMNADAFSQP SGNLSFEDQL NFRVGNGLFR RLWVSPPAST
LASDGLGPLY NARSCQRCHL KDGRGHPPES PDDSAVSMFL RISIPGPEDF DASAIEGYFA
TLPDPTYGTQ LQDFSLLGHN AEYALGVEYD EIEVPLSGGE VAMLRAPTYT ADDLGYGPLH
PDAMLSPRVA PQMIGLGLLE AIPAQDILAW ADPDDLDGDG ISGRPNIVWS IVHDAPMLGR
FGLKAGNPTV LEQSAGAFAG DIGISSPLHP NGWGECTNVQ ATCRDAIHGG DPEQDGFEID
QIGLDLVTFY SQNLAVPARR DVDDPEVLRG REVFYETNCT GCHRPNYVTN RIEGDPAQSF
QLIWPYTDML LHDMGDGLAD HRPEARASGD EWRTPPLWGI GLTEQVSGHT YFLHDGRARS
LLEAVLWHGG EAQTQRDAVV AMPPEDRAAL IRFLESL