| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1367 |
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| Symbol | |
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| ID | 3933814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1332803 |
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| End bp | 1335076 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903717 |
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| Product | hemolysin-type calcium-binding protein |
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| Protein accession | YP_509309 |
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| Protein GI | 89053858 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACC TGACCATCAC CAACGTGACC TACACGGGTG GCACGTTGAA TGCAGAGCAT
TTCAATGTGA ACGTCCTTGT TGCAGCCAAT ACGGGCGAGA CGCCCTTTGG TGGCAATGCG
GGCAACGAGC TTGGTATCCC AACGGTCGAG TCCCTCGCGG CGATGGAGAA GTTCGGGGTT
ACGTCGGTTC GCTTTCCTGC TGGTCAGGCC AATGAAATCT TCTCTGCGAC CGGATTGATT
GTGAATGGGG ACCTTCCGTC CTTCCTGCGG AACTTCCTTG TGCATGCGCA AGAAAACAAC
CTGTCGGTGA ACCTCGTGCT GCCGGTCGAG TCGCTGGAAC AGTTTGGCGG GCCGTCGCAA
GCGGAAATTC TGGAAGGCCT GCGGGACATC GCAGCGATCG TGGCCGAAGA GTTCCCGAAC
GTTGTGACGG GCTATGAACT TGGGAACGAG TATTGGGGTG GGCGAGAGCG CGGAGATGAC
ACGCGAGAGG CGGCCTATGG CGAAGCCGCA GGGCTTGCAG CGGTTGCCCT GAGTGAAGGG
GCCGCCGACT TCGGCATGGA TCCCAACATC ATCTTGCAGG CCAGCGGCAA CCTGGGCGGG
GCGTGGGACA CGCTGACTGA AGCCAATGTC GCGATCCAAG ATGCGTTTGA GGCGGTTGAA
GGTGCCATGG AGACTGTGGA TTCAGTGCTT CGGAACTTCT ACTGGCGCGA CGGGGGAACA
GGAGCCTTCG ACAACAGCAC CGGTACCTTC CAGGAGGATC GGGGCCTGGA CGAAAACCTG
AACGGGTGGG GCGCGGCCAA TTGGGACCTA TGGGCCGGAC GGGATCTCAC GACATATGTC
GGGGAGTACA ACATCACCAA CCGGCTTTCA TTCGGCGAGG ATGCCATCGA TCTGGGCATT
CACGGCGCGT CGATGCTGTT GGAGCATTAT ACCAACATGG TTGAGGCGAA CGTGGATGTC
GCCTACGCGT GGCCATTTCT GCACGCCACG CGCAACTCAT TCCTCTGGCA GCATGAGGAC
ATTGAAGTCG CAGACATTCA TGGCATGGAG ATTGTCACCA ACACCACTCG CGGCGCGATG
TATGATTTGC TGCGTCAGAC GGTTGCTGAC GGTGAGTTGG TTGATCTGAA TTGGGACACG
AACAGCGCGG TTGAAGTGAC GGCATTCCGG GATGTGCTGG GGGCCGGCAA CGGCGATACA
ATGACGTCTT ACACGAAAAC TGTGTTTCTC AGCTCTCGCA GCGATCAGTT CGAGACCCTG
AATGTGGATC TGTCCCCGTT CGTCAACGAC TACGCAAGCA TGAGCGGGCT GAGCATCTTT
TACGAAGATA CGGGCGGCCA TCACCGGGAT GCCGTCATCA CCGAGATCTC CGCCCTCGAC
CCGAACGGCG ATGGTGTCTT TTCGATTGAT CTGAACCCCT ACGAGGTTGT GCAACTCACG
TTCCAATACG GATATATGCA CTCAACCGGG GGCACCCTCA CCTCCAATAC GGGAACCACG
GTTGATGGCG GCGGTGCCCC GGGCGAGACT TTCATCCGGG GTGACGGCGC GGACACGGTC
TATGGAACTG ACGGCGCCGA CTGGATCGAT GGTGGTAACG GGAATGACCT TCTGGCCGGT
GAAGGCGGCA ACGACACCCT GATCGGTGGC GGCTCTGCAG ACACACTCAA TGGCGGTGCG
GGGGATGACA TGCTTCACGG CAACTGGGGG CGCGACTTGA TCAACGGTGA TGACGGCGAT
GATACGGCCT ATGCGGGCAC CATGGACGAC ACCGTGAACG GTGGGCTCGG CGACGATTCC
CTTTTCGGCG GGACCGGCAA TGACGTGCTC CATGGGGATA GTGGACGGGA TGTCCTCAAT
GGCCAGGACG GCGATGATGC CCTCTATGGT GACATGGATA ATGACGCCCT CAACGGGGGG
CTCGGGAACG ACACCCTGAG CGGCGGGACC GGGAACGACG CCCTTGATGG TGGCGCGGGA
TCTGATTTCC TTGACGGAGG AGCCGGAGAC GACACGTTGT TCGGAAACGC CGATGCGGAT
GTGTTCGGTT TTGACGCGGG CCACGGCCAC GATACGATTG GTGACTTTGA TGCGCAGAAC
GATCTTGAGG TGATCGATCT TTCTGGAGTT GGGCGGTTCA ACTCTTTTGA CGATGTTGCG
TCGAACATGG TTGAAGATGG GACCGGTGTC ACAATCGTGA CATCCAGCTT CAGCAGCATC
TTTTTGACGG GGGTTGAGGC CGCTGATCTC GATGCCAACG ACTTCATTTT CTGA
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| Protein sequence | MQNLTITNVT YTGGTLNAEH FNVNVLVAAN TGETPFGGNA GNELGIPTVE SLAAMEKFGV
TSVRFPAGQA NEIFSATGLI VNGDLPSFLR NFLVHAQENN LSVNLVLPVE SLEQFGGPSQ
AEILEGLRDI AAIVAEEFPN VVTGYELGNE YWGGRERGDD TREAAYGEAA GLAAVALSEG
AADFGMDPNI ILQASGNLGG AWDTLTEANV AIQDAFEAVE GAMETVDSVL RNFYWRDGGT
GAFDNSTGTF QEDRGLDENL NGWGAANWDL WAGRDLTTYV GEYNITNRLS FGEDAIDLGI
HGASMLLEHY TNMVEANVDV AYAWPFLHAT RNSFLWQHED IEVADIHGME IVTNTTRGAM
YDLLRQTVAD GELVDLNWDT NSAVEVTAFR DVLGAGNGDT MTSYTKTVFL SSRSDQFETL
NVDLSPFVND YASMSGLSIF YEDTGGHHRD AVITEISALD PNGDGVFSID LNPYEVVQLT
FQYGYMHSTG GTLTSNTGTT VDGGGAPGET FIRGDGADTV YGTDGADWID GGNGNDLLAG
EGGNDTLIGG GSADTLNGGA GDDMLHGNWG RDLINGDDGD DTAYAGTMDD TVNGGLGDDS
LFGGTGNDVL HGDSGRDVLN GQDGDDALYG DMDNDALNGG LGNDTLSGGT GNDALDGGAG
SDFLDGGAGD DTLFGNADAD VFGFDAGHGH DTIGDFDAQN DLEVIDLSGV GRFNSFDDVA
SNMVEDGTGV TIVTSSFSSI FLTGVEAADL DANDFIF
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