| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1362 |
|---|
| Symbol | |
|---|
| ID | 3933809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1326288 |
|---|
| End bp | 1327019 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637903712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509304 |
|---|
| Protein GI | 89053853 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGCA CCCTTTTCTG GTTGATGCAC TGGCGCGGCA TTATCGTTGG TCCGAAGTCT
ATTCGCGCAA TCTGGGCGAC ATATTCATGC TCCAAGATGA CATCGTCCGC CGGATCGTGT
CGACCATTTC TCCGGAGGTC GTTGGTGCTG GAAGATGAAA TCATCACCAG CCGAAACGCG
ACGTTGGCCG CGTTGGAACC CGGTGTCTGG GGCATCATCG CCGCGCCCGA AGATGAGTTG
TCCGACATTC AAACCGATCA CGTCAGGCCG GGGGACACCG CGGCGGACTA TGACGCAGTG
GACGGGATCT TGTTCCTGTC ATCATCAGGC TGGACGGATG CACAGCAAGA GATGCTGAGT
GCGTCCCTTC TGCGCCACCA CCGCCCGGTG CTGATTGCGA ACGCTGATCT TGTGGCCCCA
CGGGACACGG GATTTTCGCT CGAACCGGGC CACTTCGGTC ATCTGCTGGC GGATCAGGGC
CTTAGCAACG TGCGTTTTTT CGGCAAACCA TTCCCGGAGG TCTATGACCT GATCGAACGT
TCGCTGGCAG GCACCCGCCC CGATCAGATC ATCATGTGCG GGGACACGCT TCACACCGAC
ATTCTGGGCG CTGCCGCACG CGGCTGGAAA ACCGTGTTGG TGACCCGTGA TGGCCTCTTC
TCGGGCCACG ATACGGGGCC CTTCTGCCGG GATGCCGGGC TCTACCCCGA TTGGCGTGTG
TCTCGCATCT GA
|
|---|
| Protein sequence | MRCTLFWLMH WRGIIVGPKS IRAIWATYSC SKMTSSAGSC RPFLRRSLVL EDEIITSRNA
TLAALEPGVW GIIAAPEDEL SDIQTDHVRP GDTAADYDAV DGILFLSSSG WTDAQQEMLS
ASLLRHHRPV LIANADLVAP RDTGFSLEPG HFGHLLADQG LSNVRFFGKP FPEVYDLIER
SLAGTRPDQI IMCGDTLHTD ILGAAARGWK TVLVTRDGLF SGHDTGPFCR DAGLYPDWRV
SRI
|
|---|
| |