| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1356 |
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| Symbol | |
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| ID | 3933803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1320088 |
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| End bp | 1321344 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903706 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_509298 |
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| Protein GI | 89053847 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0142784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.791743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGA AGAAACTTAC CGCCAGCCTG CTGGCCACAA CCATGCTGGT CGGCACCGCC
GCATCTGCGC AGGATGTGAC GCTGACGATC GAAAGCTGGC GCAACGACGA CCTGACGCTT
TGGCAGGACG TCATTATCCC GGCGTTTGAA GCCGAAAACC CCGGCATCTC GGTTCAGTTC
ACGCCGTCTG CGCCTGCGGA ATACAACGCC GTCCTGAACT CGAAGCTGGA CGCAGGCTCC
GCCGGTGACC TGATCACCTG CCGTCCGTTT GATGCGTCCC TCGCGCTCTA TGAGGCGGGT
CACCTGACCG ACCTCAGCGA TCTGGACGCG ATGGCCAACT TCTCGGACGT GGCGCAATCC
GCATGGCAGA CCGATGATGG CGCGGCGACC TTCTGCATGC CGATGGCCTC CGTGATCCAC
GGCTTCATCT ACAACGCCGA CGCCTTCGCG GAGCTTGGCT TGGAAGAGCC CACGAACGTT
GACGAATTCT TCGCCGTGCT CGACGCGATT GAGGAGGACG GCAATTACAT CCCGATGGCC
ATGGGCACCG CCGACCAGTG GGAAGCGGCC ACCATGGGCT ACAACAATAT CGGGCCAAAC
TACTGGCGCG GCGAAGAAGG TCGCCTCGCC TTGATTGCCG GTGAACAATC ACTCACGGAT
CCCGAATGGG TCGGACCGCT GGAACAGCTT GCACGTTGGG GCGATTACCT CGGCCGCGGC
TATGAGGCAC AGACCTATCC GGATAGCCAA AACCTGTTCA CCTTGGGGCG CGCCGCGATT
TATCCGGCAG GCAGCTGGGA AATCACCGGC TTCAACGCGC AGGCCGACTT TGCTATGGGT
GCCTTCGCCC CGCCGGTGCC GAACGCGGGC GATGAGTGTT TCATCTCGGA TCACACCGAT
ATCGCCATCG GTCTGAACGC CGCCTCCCCC AATGCCGAAG CCGCACGCAC CTTCCTCAAT
TGGGTTGGTT CGGCTGAGTT TGCCTCCATC TACGCCAACG CGCTGCCGGG CTTCTTCCCG
CTGTCAAACG CCGAGGTTGA ACTGGAAGAT CCGCTGGCGC AGGAAATGAT TTCCTGGCGA
GGGGAGTGTG AAAGCTCGAT CCGGTCCACC TACCAGATCC TGTCGCGCGG CACGCCGAAC
CTGGAAAACG AGACGTGGAA CGCCTCCACC CAGGTGATCC GTGGCGCAGA AGCCCCCGCC
GACGCCGCCG CGCGTCTGCA GGAAGGCCTC GCCTCCTGGT ACGAACCGCA GCAGTAA
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| Protein sequence | MSMKKLTASL LATTMLVGTA ASAQDVTLTI ESWRNDDLTL WQDVIIPAFE AENPGISVQF
TPSAPAEYNA VLNSKLDAGS AGDLITCRPF DASLALYEAG HLTDLSDLDA MANFSDVAQS
AWQTDDGAAT FCMPMASVIH GFIYNADAFA ELGLEEPTNV DEFFAVLDAI EEDGNYIPMA
MGTADQWEAA TMGYNNIGPN YWRGEEGRLA LIAGEQSLTD PEWVGPLEQL ARWGDYLGRG
YEAQTYPDSQ NLFTLGRAAI YPAGSWEITG FNAQADFAMG AFAPPVPNAG DECFISDHTD
IAIGLNAASP NAEAARTFLN WVGSAEFASI YANALPGFFP LSNAEVELED PLAQEMISWR
GECESSIRST YQILSRGTPN LENETWNAST QVIRGAEAPA DAAARLQEGL ASWYEPQQ
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