| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1354 |
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| Symbol | |
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| ID | 3933801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1318239 |
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| End bp | 1319078 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903704 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509296 |
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| Protein GI | 89053845 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0981879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG CACGCCGCAA TCCCGTCAAC CTCTTCGCCG CCCATGGCAT CCTGATCTTC
TACACGGTCA TCGCCCTGTT TCCGGTGTTT GTGATCCTCA TCAATAGCTT CAAGGAGCGG
CGGTCGATCT TTCGTGAGCC TCTGGCCCTC CCGGATGGGG AAAGTTTCTC AACCGTCGGA
TACGAGACGG TCTTCAACCA AGGCGATTTC TTCCTCTACT TTCAGAACTC GCTGATCGTC
ACCGTCGCCT CCCTGTTCCT TGTCCTGCTG TTCGGGGCCA TGGCCGCCTT CGCGCTGACC
GAATACAAGT TCAAGGGCAA CACGCTGATG GGCCTCTATC TGGCGCTCGG CATCATGATC
CCGATCCGCA TCGGCACCGT CGCAATTCTT GAGATGATGG TATCCACCGG TCTGGTGAAC
ACGCTCTGGG CGCTGATCCT GGTCTACACC GCGCAAGGCC TGCCGCTGGC CGTCTTCATT
CTGTCGGAAT TCATGCGACA GGTGAGTGAT GACCTGAAAA ACGCGGGCCG CATTGATGGG
TTGAATGAAT ACACAATCTT CTTCCGCCTT GTTTTGCCGC TGGTCCGTCC GGCCATGGCA
ACCGTCGCCG TGTTCAACAT GATCCCGATC TGGAATGACC TGTGGTTCCC CCTGATCCTG
GCCCCGGCGG AGGAAACCAA GACCCTCACG CTTGGCTCTC AGGTTTTCAT CGGCCAGTTC
GTGACCGACT GGAACGCGGT GCTGTCCGCG CTGTCGATGG CGATCCTGCC GGTTATGGTC
CTCTACGTCA TCTTCTCACG CCAACTGATC CGCGGCATCA CCTCCGGCGC CGTCAAATGA
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| Protein sequence | MNKARRNPVN LFAAHGILIF YTVIALFPVF VILINSFKER RSIFREPLAL PDGESFSTVG
YETVFNQGDF FLYFQNSLIV TVASLFLVLL FGAMAAFALT EYKFKGNTLM GLYLALGIMI
PIRIGTVAIL EMMVSTGLVN TLWALILVYT AQGLPLAVFI LSEFMRQVSD DLKNAGRIDG
LNEYTIFFRL VLPLVRPAMA TVAVFNMIPI WNDLWFPLIL APAEETKTLT LGSQVFIGQF
VTDWNAVLSA LSMAILPVMV LYVIFSRQLI RGITSGAVK
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