| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1351 |
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| Symbol | |
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| ID | 3933798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1315332 |
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| End bp | 1316663 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903701 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_509293 |
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| Protein GI | 89053842 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTGGC AACAACTCCA ACAACAAACT ATTGAGCTTG GCTGGGATTT CTACGTCCCG
ATCATCGTCT TCGTGATCCT CGTCGCCCTG GCCGTTCCGG TCTGGGCCTC CATCGGGGCG
GCGGCGATCA TCATGTTGAT GATGTCCGGC GCTTTGCCCC TGTCATTGGT CGGTGAAAGC
CTGTTCCACG GCATTGACCA CTTCGCCCTG ACCGCCGTGC CGCTGTTTAT TCTGACCGGT
GACGTGCTGG TCCGAACGGG GCTGTCGAAG AAGTTTCTTG ATGTGGCCGA AGCCATCACC
TGTTGGGCCA AGGGGGGCTT CGGCTCGGCT ACGGTTCTGG TCTGCGGCAT GTTCGCCGCG
ATTTCGGGCT CGGACGCAGC GGGGGCCGCT GCCGTGGGTC GCATGACCAT CGCGCGATTG
GTGGAATCCG GCTATCCGCG CCCCTATGCC TGTGCGCTGG TCGCCGCGGG CGCCTGCACC
GGTATCCTGA TCCCGCCGTC GATTGCCTAT ATCGTCATCG GGCTGGTGCT GGGTGTGAAC
GTCTCCATCC TGTTTCTGGC GGCTGTGATC CCCGGCACTT TGGTTCTGGG CGCGATCCTG
TTGACCAACA TCATTGTCAA TCGCCGCCAT GCCTATGAGG GCGGCGGGTT GATGACCGCC
GGTGAGTGGG CCGCGAACCT TTGGAAGACG ATCAAGTCCG GTTGGTACGC GTTTCTGGTG
CCCGGCATCA TCTTCTACGG TATCTTCTCT GGCCGTCTGA CCCCGACCGA AGCCGGGGCC
GTTGCCGTCG TGACCTGTAT CGCCATCGGC TTCATTATCG GCACGCTGAA ATTCAGCGAC
TTCCCCGCGA TGCTGGTCAG TTCTGCCAAG GTGAACGGGG TGATCCTGCC GATCATCGCC
TTCTCCCTGC CACTGGCCCA AGCCCTCGCC ATTCTTGGTG TGCCGCAGGG GTTTGTTGCC
GCCGCGACGG GTGTCAGCGA TGATCCTCGT GTCTTGATCC TGATGATGAT CCTGATCCTG
ATTGCGGCCG GTTGTGTGAT GGAGACGACG CCCAATATCG TGATCCTGGC GCCGATCCTG
TTCCCGCTGG CCCAGAACAT CGGCATGAAC GAGATCCAGT TCTGCGTCAT GATGATCACC
GCGCTCGGCG TGGGCTTTAT TACCCCGCCG CTTGGGCTCA ACCTATTCGT GGTGTCGGGG
ATAACGGGGG AATCGATCCT CAAGATCGCA GCGCGCGCCG TGCCGTTTGT GGGCTTCATG
CTGATCGTGA CGCTGATGAT TGCCTACATC CCCTGGATCT CAACGGCGCT TCTGCCTGAT
GTGTATCGCT AG
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| Protein sequence | MLWQQLQQQT IELGWDFYVP IIVFVILVAL AVPVWASIGA AAIIMLMMSG ALPLSLVGES
LFHGIDHFAL TAVPLFILTG DVLVRTGLSK KFLDVAEAIT CWAKGGFGSA TVLVCGMFAA
ISGSDAAGAA AVGRMTIARL VESGYPRPYA CALVAAGACT GILIPPSIAY IVIGLVLGVN
VSILFLAAVI PGTLVLGAIL LTNIIVNRRH AYEGGGLMTA GEWAANLWKT IKSGWYAFLV
PGIIFYGIFS GRLTPTEAGA VAVVTCIAIG FIIGTLKFSD FPAMLVSSAK VNGVILPIIA
FSLPLAQALA ILGVPQGFVA AATGVSDDPR VLILMMILIL IAAGCVMETT PNIVILAPIL
FPLAQNIGMN EIQFCVMMIT ALGVGFITPP LGLNLFVVSG ITGESILKIA ARAVPFVGFM
LIVTLMIAYI PWISTALLPD VYR
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