| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1345 |
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| Symbol | |
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| ID | 3933792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1310550 |
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| End bp | 1311275 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903695 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_509287 |
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| Protein GI | 89053836 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC TGACAGCCGT CATTACGGGC GGGAACAAGG GGATCGGCGC CGATCTGGCG
CGCGCGTTGC TCGATCGGGA CTACACCGTC GTCTCGGTCT CCCGCCATGC GCCCGATTGG
ACCCATCCGC GATTGTCCTC GGTGGAGGCG GATTTGCTGA ACGCGGAGAC AGTCAAGCTC
GCGGCGGACC ATATCGCCGC AACCCATGAC GTCAGCCATC TGATCCACAA TGCAGGGATG
ATCTGGCCCA ATCTGGTGGA GGAGGCGCAG CCCTCGGACA TCACCGGCCT GGCACAACTG
CACCTCGGCT CGGCGCTAAC GCTGCTGCAA GCCACGCTAC CCTCAATGAA AGCGCGCGGC
ATGGGGCGGG TCATGTTCAA TGCCTCCCGT GCGGCCCTCG GCGCGCCCAC GCGCACGGCC
TACAGCGCCA GCAAGGCAGG TATGATCGGC ATGGCGCGCA CCTGGGCGTT GGAACTTGCG
CCACATGGCA TCACCGTGAA CGTCGTCGCC CCCGGTCCGA TCCTGACGGA CAATTTCTGG
GGCATCATAG ACAAAGACAG CCCCCAGCAA GAGGCGCTGG CCAAACGTAT CCCGGTGGGT
CGGCTTGGCA CGGTCGAGGA CGTCACCAAC GCGTTCCTGT TTTTCTGCGA TCCGACCAAT
GGGTTCGTGA CGGGGCAAAC GCTCTATGTG TGCGGTGGGG CCAGCGTTGG GACGCTCCAG
ATCTAG
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| Protein sequence | MSDLTAVITG GNKGIGADLA RALLDRDYTV VSVSRHAPDW THPRLSSVEA DLLNAETVKL
AADHIAATHD VSHLIHNAGM IWPNLVEEAQ PSDITGLAQL HLGSALTLLQ ATLPSMKARG
MGRVMFNASR AALGAPTRTA YSASKAGMIG MARTWALELA PHGITVNVVA PGPILTDNFW
GIIDKDSPQQ EALAKRIPVG RLGTVEDVTN AFLFFCDPTN GFVTGQTLYV CGGASVGTLQ
I
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