| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1340 |
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| Symbol | |
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| ID | 3933787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1306158 |
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| End bp | 1307177 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903690 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_509282 |
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| Protein GI | 89053831 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.259012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTT CCAGAGGATG GGCCTGTGCC GCCCTCGTCA GCGTCGCGCT GACCGCCCCC
GCTTTGGCTC AGGACACGAC CCTGCGCATT TCGACCTGGC TGCCACCCAC CCACGGCATC
AACACCAATA TCTTCGGCGG CCTGATCGAG ATGATCGAAG ATGCCACCGA TGGGGCCGTC
ACTGGTGAGT TGGTGTCCGG TCTCGCCCCG CCGCCTGCAC AGATGGACTT GGTGCTGGAT
GGCGCGGCCG ACATGGCCAT CATCTTCCAC GGCTATCAAC CCGGCCGTTT CGTCGGCACG
CAGTTGATCG AGTTGCCCGG CTACACCGGC AGCGCAGAGG CGGCGTCCGT CGCTTACTGG
CGCGCCCATG AGGCGCATCT GGCCGCTCTG GATGAGCACC GAGGCGTGAT CGTCGTCGCG
TTGAACACCC ACGGCCCGGG TCAGTTGCAC CTTCGCGAAC CTGCCTATGC GTTGGCTGAC
CTGGACGGTC TTCGTACCCG CATCGGCGGG GGCGTGGCTG GCAACGTTGG CTCTGCCATC
GGGCTGGTGG GCGTGAACGT CCCTGCCCCG CAGGTCTATG AAACCCTTGA GTCCGGTGCC
GCAGATGCCG TGGCGATGAA CGTGGGCGAG CGCATCGGCT TTCGCCTGAA TGAAGTCGCC
CCTGCCCTCT ACGAAATGCC CGGTGGCTTC TATCGCGGCT CCTTCGCCAT CATCATGAGC
CAGGAAACCT TTGACGGCCT GCCTGAGGAT GTCCAAACCG CCCTGGCCGA GCAGGTCCTG
GGTGAGCCTG CCAGCCGCAT GGCCGGTGCC GCGTGGGATC TGTCCGATCA ACTGGCCTAT
GAGGCCATGG GGGACGGCAC CACCTCCGTG GAAGCCAGCG CCGAAGATCA GGCCGCTTTC
GCGGAGATCG CCGCAACGGT GCGCGAAGGC GTGCTGGCTG AGCTGTCCGA AGCCGGGGTC
GATGCCGAGG CCGCGTATCA GCTGGTCGTC GATGCAATGG CAGAAGTGTC TGCCGAATAA
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| Protein sequence | MNFSRGWACA ALVSVALTAP ALAQDTTLRI STWLPPTHGI NTNIFGGLIE MIEDATDGAV
TGELVSGLAP PPAQMDLVLD GAADMAIIFH GYQPGRFVGT QLIELPGYTG SAEAASVAYW
RAHEAHLAAL DEHRGVIVVA LNTHGPGQLH LREPAYALAD LDGLRTRIGG GVAGNVGSAI
GLVGVNVPAP QVYETLESGA ADAVAMNVGE RIGFRLNEVA PALYEMPGGF YRGSFAIIMS
QETFDGLPED VQTALAEQVL GEPASRMAGA AWDLSDQLAY EAMGDGTTSV EASAEDQAAF
AEIAATVREG VLAELSEAGV DAEAAYQLVV DAMAEVSAE
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