Gene Jann_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1337 
Symbol 
ID3933784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1303513 
End bp1304289 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID637903687 
Productputative cyclase 
Protein accessionYP_509279 
Protein GI89053828 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC TTGAAAGTTT GGCTGCGGAC ATCACCGCCG GCACCGTGCG CATCGTCGAT 
CTGACCCACA CATTGGACCC AGATTTTCCG GTTATCATCT TGCCGCCGGA ATTCGGCCAA
TGTGCCCGGT TTCGCATGGA AGAGATCAGC GCCTACGACC ATCGCGGGCC AGCGTGGAAG
TGGCACAACC TGACCTTGTC CGAGCATACG GGCACCCATT TCGACGCGCC GTCGCACTGG
ATATCTGGCC GTGATGTGCC CAACGGCTCG GTCGATGAAA TCCCGGTGGA GGCGTTTGTC
GGCCCGGTCG TGGTCATCGA TTGCTCGGCG GGCGCTGCGG CAGACGATGA TTTTGAGCTG
ACGCCAGAGG TTATCGAGGC GTGGGAGGCG GAGCACGGGG TGATCCCGAT AGGTGCGTGG
GTGTTGATGC GCACCGACTG GTCCAAACGA TCCGGCGCGG CGTATCTGAA CATGCGCGAG
GATGGTCCAC ATTCCCCCGG GCCGACCCCG GATGGCATTC GGTTCCTGGT TGAGCAGCGC
GATATTCGAG GCTTTGGCAC GGAGACCGTT GGCACAGATG CGGGGCAGGG GTCGCATTAC
ACGCCGCCCT ATCCGGCGCA TTACGTCCTG CACGGTGCGG GGAAGTACGG GCTTCAGTGC
CTCGCAAACC TTGACCAATT GCCGCCCACT GGCGCCGTGC TGATTGCGCC GCCGCTCAAG
ATCAAGAACG GCACCGGCAG CCCGCTGCGT GTTCTGGCGA TGGTGCCAAA CCCATAA
 
Protein sequence
MSNLESLAAD ITAGTVRIVD LTHTLDPDFP VIILPPEFGQ CARFRMEEIS AYDHRGPAWK 
WHNLTLSEHT GTHFDAPSHW ISGRDVPNGS VDEIPVEAFV GPVVVIDCSA GAAADDDFEL
TPEVIEAWEA EHGVIPIGAW VLMRTDWSKR SGAAYLNMRE DGPHSPGPTP DGIRFLVEQR
DIRGFGTETV GTDAGQGSHY TPPYPAHYVL HGAGKYGLQC LANLDQLPPT GAVLIAPPLK
IKNGTGSPLR VLAMVPNP