| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1332 |
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| Symbol | |
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| ID | 3933779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1295777 |
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| End bp | 1297969 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903682 |
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| Product | thiamine pyrophosphate enzyme-like TPP-binding |
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| Protein accession | YP_509274 |
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| Protein GI | 89053823 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.369932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATGC ATATATCAAC AGGCGAGGGC AGGGCCGTGG CAGAACGTTC CTTTGCGAAA
GAAGTCCAGC ACCTCAGGAT CGGCGAGGGG GAGGTCTTTC GCGGTGAGGG TATTTTGGCC
ATCACGAAGG CTCTGCTGGA AAATGGCGTG GGCTATGTCG CGGGGTATCA GGGTTCACCG
ATCTCCCATT TGATGGACGT GCTGGCCGAC GCCCAGGATA TTCTGGCGGA GATGGGCATT
CATTTTGAAG CCTCCGCGTC TGAGGCCACG GCCGCCGCGA CCCTGGCGGC GTCCGTTCAC
TACCCGATCC GTGGCGCCGT GACGTTCAAA TCCACCGTCG GCACGAACGT CGCCTCGGAC
GCGCTGGCCA ACCTGGCGTC TGGCGGTGTG ACGGGCGGCG CGCTTGTGAT CGTGGGGGAG
GATTACGGCG AAGGGTCCTC CATCATGCAG GAACGCAGCC ATGCGTTTGC GATGAAAAGT
CAGATCTGGC TGCTGGATCC GCGCCCCAAT CTGACGTCGA TGGTCAAGGC TGTGGGCGAC
GGGTTCGCGC TGTCTGAGGC GTCAAACAGT CCTGTCATGC TGCAAATGCG GGTGAAATCC
TGTCACCTGC TGGGAGAGTT CATCGCGAAG GACAACGTTC CGCCGTCCAT GACGGTCAAA
GATGCCTTGG AAAACCCACG GCGCGACATA GACCGGATCG TGCTGCCGCC CGCCTCGTTC
CTGCATGAGC AGGAGAAGGT CACCAAGCGC CTTCCCGCAG CCATCGACTA CATCCGCGCG
AACACGCTGA ATGAACGGTT TGGGCCGGTG CAGGGGAAGG TCGGGATCGT CTGCCAGGGC
GGCCTTTACA ACGGTGTGAT CCGCGCACTT CAGCGCCTTG GGCTGGCGAA TATCTATGGT
GATTGTGACG TGCCATTGCA TGTCCTGAAT GTGACCTACC CGCTTGTGGA TGATGAGGTG
CTTGAGTTTG CCCGGGGCAA GGATAGCATT CTAGTCATTG AAGAAGGCCA TCCCGCTTAT
ACCGAGCAGA ATATCCGCGC GATCCTGCAC AAGGCGGGGG CTCGCTGCGC GGTGGACGGC
AAGGGGCCGT TCCCGGAGGC TGGCGAATTG ACCGGGCCGG TGATGCTTGA TGGGGTATCG
AGGTTTCTCC GGGATGCAGC GCCTGATCTC ATGCCAGCCG TGGCCCGTGC GCCCAATGCG
CCGCCCACGC TGAAATTGCC GGAACTTGCC GACACGGTCC CCGCCCGCCC GCCGAGCTTT
TGCGTCGGTT GCCCGGAGCG CCCGATCTTC GCGGCCACCA AATTGATCGA ACAGGAACTC
GGACCCCACC ACATTGCCAG CGACATCGGC TGCCACCTGT TCTCCATCAA CGCGCCGTTC
GACCTGGGGG CGACGACGAT GGGCTACGGC CTTGGGCCCG CCTCGGCAGC CGCATTCAAT
GACAAGACGG CGGGGCGGCG GTCGATCTCG TTTCTGGGCG ATGGCGGATT CTGGCACAAT
GGATTGACCT CTTCGATCGG CAACGCCGTG TTCAACGACA ATGACGGCGT GATCATCATC
GTCGACAACT ATTATTCGGC GGCGACGGGG GGGCAGGATA TTCTGTCGTC TCGGGCCGAC
AACACATCGA AATCAACCAA GCACCCGATC AAGCAGGCGG TCGAAGGGAT GGGTGTCAAA
TGGGTGCGGC AGCTGGATCG CACCTATGAT GTGGGCAAGA TGCAAGCGAC GTTGAAGGAA
GCGCTGGAAA CACCGGAGAC CGGGCCAAAG GTCATCATCG CGTCGTCCGA GTGTATGTTG
AACCGACAGC GGCGGGAGAA ACCTTTGGCA AAAAAGGCAA TCGCGGACGG CAAGCGCGTG
ACGCGGACAC GCTTTGGCGT GGATGAGGAT GTGTGCACTG GTGATCATGC TTGCATCCGC
CTGTCCGGCT GCCCGTCATT GTCACTGAAA ACGCTTGAGG ATCCGCTGCG GGATGATCCC
GTGGCCAGTA TCGATCAAAC CTGTGTGGGT TGCGGAAATT GCGGTGAAGT GGCGGATGCG
GCCGTGCTGT GCCCATCATT CTATCAGGCC GATCTGATCC AGAACCCATC CAAACTGGAC
CGCATCCTCA GCACTTGGCG GCAGCGCCTG ATTGCCAAGC TCCAAAAGCG CCGGGATGCG
CGGCGGCTGG TCTTTTCAGG AGATGGAGCT TGA
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| Protein sequence | MQMHISTGEG RAVAERSFAK EVQHLRIGEG EVFRGEGILA ITKALLENGV GYVAGYQGSP
ISHLMDVLAD AQDILAEMGI HFEASASEAT AAATLAASVH YPIRGAVTFK STVGTNVASD
ALANLASGGV TGGALVIVGE DYGEGSSIMQ ERSHAFAMKS QIWLLDPRPN LTSMVKAVGD
GFALSEASNS PVMLQMRVKS CHLLGEFIAK DNVPPSMTVK DALENPRRDI DRIVLPPASF
LHEQEKVTKR LPAAIDYIRA NTLNERFGPV QGKVGIVCQG GLYNGVIRAL QRLGLANIYG
DCDVPLHVLN VTYPLVDDEV LEFARGKDSI LVIEEGHPAY TEQNIRAILH KAGARCAVDG
KGPFPEAGEL TGPVMLDGVS RFLRDAAPDL MPAVARAPNA PPTLKLPELA DTVPARPPSF
CVGCPERPIF AATKLIEQEL GPHHIASDIG CHLFSINAPF DLGATTMGYG LGPASAAAFN
DKTAGRRSIS FLGDGGFWHN GLTSSIGNAV FNDNDGVIII VDNYYSAATG GQDILSSRAD
NTSKSTKHPI KQAVEGMGVK WVRQLDRTYD VGKMQATLKE ALETPETGPK VIIASSECML
NRQRREKPLA KKAIADGKRV TRTRFGVDED VCTGDHACIR LSGCPSLSLK TLEDPLRDDP
VASIDQTCVG CGNCGEVADA AVLCPSFYQA DLIQNPSKLD RILSTWRQRL IAKLQKRRDA
RRLVFSGDGA
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