Gene Jann_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1331 
Symbol 
ID3933778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1295294 
End bp1295743 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content60% 
IMG OID637903681 
ProductMarR family transcriptional regulator 
Protein accessionYP_509273 
Protein GI89053822 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.524109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCC ATGAGGGGCA GGGTCTGTCC CGGTTCGCGC CGTATCTGAT GAACCGCATC 
GCGCATCGCT ACAATCAGAA CCTGCATGCG TCCGTCACGG GTATAGGTCT GACCGTGCCG
AAGATGCGCG TTCTGGCAGC GCTTGCTGCC ATGGGGGAGC TGACGATCAA TGACCTGTCC
GTCGTTGCGA TCTCTGAGCA GTCGACGATG AGCAGGACCC TGGACCAGAT GGAGCGGGAG
GGCCTGATCG AACGCAAGGT CAGCGAGAAG GACAGTCGGG TCAGGCTTGT CGACCTGACA
CCTGCGGGGT TGTCCGCCTA TCGTACGGTT TGGCCTGAAA TGAGCGCAGC GGAAGAAGCC
CTGTTCACGG GTCTGTCGGA CACGCAGCGC GAGGATTTTC TGGATACCCT GTCGCAGATC
CTGCTGAATA TCCGGCAGAA CGAGTTGTAG
 
Protein sequence
MAPHEGQGLS RFAPYLMNRI AHRYNQNLHA SVTGIGLTVP KMRVLAALAA MGELTINDLS 
VVAISEQSTM SRTLDQMERE GLIERKVSEK DSRVRLVDLT PAGLSAYRTV WPEMSAAEEA
LFTGLSDTQR EDFLDTLSQI LLNIRQNEL