| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1330 |
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| Symbol | |
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| ID | 3933777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1294788 |
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| End bp | 1295192 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637903680 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_509272 |
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| Protein GI | 89053821 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.805737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAATA AAATAGTGCA ACCTGAAGGA TGGGCACCCG CGAAGGGCTA TGCGAACGGA
ATGCTGGCAC CCGATGGTAC GCTCTATATC GGCGGTCAGA TCGGCTGGAC TGCGGATCAG
GAGTTCGAGA GCCACGACTT CATCGGTCAG ATGGAACAGG CTCTGCGCAA TATTGTAGAT
GTTGTGCAGG CAGCGGGCGG CGAGGTCGAG GATATCACCC GGCTGACGTG GTTCGTGATC
GACAAGAAGG AATACGCCGC GCGTCAACGG GAAGTTGGTG AAGTCTATCG ACGCGTGTTG
GGGCGTCATT TTCCGGCGAT GTCCATGTTG ATCGTGGCAG GCTTGGTTGA AGACGACGCT
TTGCTTGAGA TTGAGGCAAC GGCTTACATC GCCCCACCTG GCTAA
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| Protein sequence | MTNKIVQPEG WAPAKGYANG MLAPDGTLYI GGQIGWTADQ EFESHDFIGQ MEQALRNIVD
VVQAAGGEVE DITRLTWFVI DKKEYAARQR EVGEVYRRVL GRHFPAMSML IVAGLVEDDA
LLEIEATAYI APPG
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