Gene Jann_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1325 
Symbol 
ID3933772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1290239 
End bp1290712 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID637903675 
ProductMarR family transcriptional regulator 
Protein accessionYP_509267 
Protein GI89053816 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGG ATGAACGTAC CGCGCCGGAG ACCCTGTCGA AGGAACGGTT GCGCTTGTGG 
CTTCGATTTC TGAAAGCCAG CCGTTCGATT GAGAGCGTTC TGCGCGAGAA CCTCCGCGCC
GAATTCGCGA CGACATTGCC CCGGTTCGAT GTCATGGCCG CCCTGTCGCG GTTTGAGAAT
GGGCTGAAGA TGAGCCAACT CTCGGACGTG CTGCGGGTGT CCAATGGCAA TGTCACCGGC
ATCGTTGATC GGCTGTCAGA GGATGGTTTG CTGGTCCGTG TGCCGGTTCC GGGGGACAGG
CGCGCGTCTC TTGTGCGTCT CACCCGGCGC GGCGTGGAGG AGTTTCAACG TCAGGCAACA
GCCCATGAGG CGTGGATCAG CGATATGCTC GGCGATTTCA CCGCTGAGGA GGCGCGCGAT
ATTCGATTGC GGCTGGAGCA ACTTGAAGAC AGTGCCAACG GAGACGAGAC ATGA
 
Protein sequence
MQTDERTAPE TLSKERLRLW LRFLKASRSI ESVLRENLRA EFATTLPRFD VMAALSRFEN 
GLKMSQLSDV LRVSNGNVTG IVDRLSEDGL LVRVPVPGDR RASLVRLTRR GVEEFQRQAT
AHEAWISDML GDFTAEEARD IRLRLEQLED SANGDET