| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1325 |
|---|
| Symbol | |
|---|
| ID | 3933772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1290239 |
|---|
| End bp | 1290712 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637903675 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_509267 |
|---|
| Protein GI | 89053816 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGG ATGAACGTAC CGCGCCGGAG ACCCTGTCGA AGGAACGGTT GCGCTTGTGG
CTTCGATTTC TGAAAGCCAG CCGTTCGATT GAGAGCGTTC TGCGCGAGAA CCTCCGCGCC
GAATTCGCGA CGACATTGCC CCGGTTCGAT GTCATGGCCG CCCTGTCGCG GTTTGAGAAT
GGGCTGAAGA TGAGCCAACT CTCGGACGTG CTGCGGGTGT CCAATGGCAA TGTCACCGGC
ATCGTTGATC GGCTGTCAGA GGATGGTTTG CTGGTCCGTG TGCCGGTTCC GGGGGACAGG
CGCGCGTCTC TTGTGCGTCT CACCCGGCGC GGCGTGGAGG AGTTTCAACG TCAGGCAACA
GCCCATGAGG CGTGGATCAG CGATATGCTC GGCGATTTCA CCGCTGAGGA GGCGCGCGAT
ATTCGATTGC GGCTGGAGCA ACTTGAAGAC AGTGCCAACG GAGACGAGAC ATGA
|
|---|
| Protein sequence | MQTDERTAPE TLSKERLRLW LRFLKASRSI ESVLRENLRA EFATTLPRFD VMAALSRFEN
GLKMSQLSDV LRVSNGNVTG IVDRLSEDGL LVRVPVPGDR RASLVRLTRR GVEEFQRQAT
AHEAWISDML GDFTAEEARD IRLRLEQLED SANGDET
|
|---|
| |