Gene Jann_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1307 
Symbol 
ID3933754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1267236 
End bp1268258 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content57% 
IMG OID637903657 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_509249 
Protein GI89053798 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGAG TTGACAACTT GGACGACGAA AAGACTCTGA TGGCCATGAA CACCCACAAA 
AGCACGGAAG TTTCTAACGT GATCGACGTG GCGATCATCG GCGGCAGCTT CGCGGGTTTG
TCTGCCGCCT ATCCGCTTGT GCGGGCACGG CGAAGCACCG TGATGTTCCA TACCGGCGAG
ACCCGAAACC GGTTCTCTGC CGAAAGTCAC AACTGGATCG GGCTGGACGG CGTTGGCCCG
GAAAGCGTCC ATCAGTCAGG AATTCACGAA CTGGCTAAGT ATTCCGATTT CTCGATCGTG
AAAGATCGGG TGGTCCGAGC GCAGCGGTCC GAGACACATC AACACCTCGG GGTGCCGATC
ACCGAGCTGA CAACAGCCTT GGGGAGCACC ATCCATGCAC GGCGCGTTAT CTTGGCGACT
GGGATGCGGG ATACATTTCC CTTGGATATC GAAGGGTTGG AAGACTGCTG GGGTCAGTCC
GTACTGCAAT GCCCGTATTG TCATGGATAC GAACATCGTG ACGTGCCAAC GGGCATCCTG
CACGGTGGTC CGCCATCTCT GCATCAAGCG AAGAACCTGC CGGATTTCAC GAACGATCTG
GTTTATTTCA CCAACGGGGC CGAGATCGAG GCCTCGGACA TCGCAGATCT GGAAGCGCGC
GGATACCGCG TTGAGACTGG GGCTGTGAGC AGCATTGAGC ACCATGACGG AGCGATGAGT
GCCGTGGCCC TACGTGGCGG CACGAAAATC GCAAGCGAAG CGCTCTACAT CATTCCTCGC
GCAGCATTCG CAACCGACCT ACATGCACAG TTGGGATGTG AAGAAATCGA AGGGCCTTTC
GGACCCTATG TTACCGTGGA CGATCTGCAC GAGACCACGC AGCGCGGTGT TTTCGCCGCA
GGAGACATGA CACGTCCTGC CTTCAATGCC GTCTGGGCAG GAGCAGACGG GAATCGTGCA
GGAATTTTCG CGCATCAGTC GCTGGTATCA GAGCATAACC CATACCGCGG AGCGCGACTT
TGA
 
Protein sequence
MWRVDNLDDE KTLMAMNTHK STEVSNVIDV AIIGGSFAGL SAAYPLVRAR RSTVMFHTGE 
TRNRFSAESH NWIGLDGVGP ESVHQSGIHE LAKYSDFSIV KDRVVRAQRS ETHQHLGVPI
TELTTALGST IHARRVILAT GMRDTFPLDI EGLEDCWGQS VLQCPYCHGY EHRDVPTGIL
HGGPPSLHQA KNLPDFTNDL VYFTNGAEIE ASDIADLEAR GYRVETGAVS SIEHHDGAMS
AVALRGGTKI ASEALYIIPR AAFATDLHAQ LGCEEIEGPF GPYVTVDDLH ETTQRGVFAA
GDMTRPAFNA VWAGADGNRA GIFAHQSLVS EHNPYRGARL