| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1301 |
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| Symbol | |
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| ID | 3933748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1259591 |
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| End bp | 1260532 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903651 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_509243 |
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| Protein GI | 89053792 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0556044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAG CGCTAGAGCT TTTGGCCAAC ACCAGTCTTT GGGCGGCGGT CCTGCGCATC
GCCACGCCGT TGATCTTCGG TGTGCTTGGC GCGCTGCTGT GCGAACGGGC CGGTGTACTC
AATCTCGGGA TCGAAGGCAT CATGACCATG GGTGCCATGA CCGGCTGGCT CACTGTCTAT
ATGGGTGGCG ACCTCTGGAC CGGCTTGATA GTGGCGGCGC TGTGTGGGGC GATCATCGGG
TTACTACACG CGATCCTGAC GGTGCCCCTT GGTTTGTCAC AACATGTATC CGGGCTTGGC
ATCACGCTGT TTGCCTCGGC GCTATCCTAT TACCTCTATC GCTTGCTGGT GGAGGTCGGT
GATCTGCCGC CCACGATTGA GCCGTTCCGC CCGCTCGACG TGCCAATCCT GTCGGACATA
CCGGTCCTCG GCCCAATCGT ATTCCAGCAA ACCATGCCCA CATATTTGGC GCTGATATCG
GTCGTCATCT TGGCCTATGT TCTGGCCCGC ACGCCGCTTG GGCTGGCCAT CCGGATGACC
GGTGAGAATC CCCACGCGGT TGAGGCGCAG GGGCTGAACC CGATCTTGAT CCGTATCGGC
GCAGTGGTCG CAGGCTCAGC CCTTATGGCC ATTGGCGGGG CCTTCCTGAC GATGGCCGCG
TTCAACAGCT TCTTTCCCGA AATGGTGCAA GGACGCGGGT GGATCTGCAT CGCGCTCGTT
GTCTTCGCCT CATGGCGGCC CGGAAAAGCG CTGGTCGGTG CGCTGCTCTT TGCCTTCTTC
GATGCCTATC AGTTACGCCT CCAGACGGTG GTCGAAGGGG TCCCCTATCA ACTCTTCCTG
ATGGCACCCT ACGTCTTGTC GATATTGGCC CTCGTGCTTG TCGCCCGCCG TGCGGAAGTG
CCAGAGGCGT TGATGGCCCC CTTCCGGCGC GGAGAGCGCT AG
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| Protein sequence | MIEALELLAN TSLWAAVLRI ATPLIFGVLG ALLCERAGVL NLGIEGIMTM GAMTGWLTVY
MGGDLWTGLI VAALCGAIIG LLHAILTVPL GLSQHVSGLG ITLFASALSY YLYRLLVEVG
DLPPTIEPFR PLDVPILSDI PVLGPIVFQQ TMPTYLALIS VVILAYVLAR TPLGLAIRMT
GENPHAVEAQ GLNPILIRIG AVVAGSALMA IGGAFLTMAA FNSFFPEMVQ GRGWICIALV
VFASWRPGKA LVGALLFAFF DAYQLRLQTV VEGVPYQLFL MAPYVLSILA LVLVARRAEV
PEALMAPFRR GER
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