Gene Jann_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1300 
Symbol 
ID3933747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1258612 
End bp1259130 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content55% 
IMG OID637903650 
Producthypothetical protein 
Protein accessionYP_509242 
Protein GI89053791 
COG category[R] General function prediction only 
COG ID[COG5485] Predicted ester cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.968882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAG CTATGAAGAA AAATGTAATC ACTGCGGCGG CACTGATGAC GACAATCGCA 
GCGTCCTCTA GCGCCATTGC GCAGGACCGA TCCCCTATCG AAACACAAAA CGTGGAAACC
GTGTTGAGGT TATTTGACGA GGGCTGGGGT GCCCAGGACG GTTGGCGTGA CGTCTGGAGA
GAGACGATGA CGCCGGGATT CCGGTCAATT TTCCACTCCA ATCAAGCCGT CGAGGGCATT
GAGCAGGCTA TCGCGTTTAA CGCAGTTCTA TTTGAGGGTT TCCCTAGGCT AGAAGTAGTA
GTCGAGAATG TTACGGTTGA GGGCGACAAC GTTGTTGTGC AAGCGCGCCT GACAGGTGCG
CAGGACGGAC CGTTCTTGGG CGTGCCACCC TCTGGCCAAA TGGTGGATGT ACCAGACGTC
ACACTCTTCA CGCTCGCCGA CGGTCAGGTT ATCGAGATGC GTTACTTCAC CGATTTACTC
GCCGTCATGA CGGCGATCAG TGCGCCTCCA GAGAACTAA
 
Protein sequence
MEKAMKKNVI TAAALMTTIA ASSSAIAQDR SPIETQNVET VLRLFDEGWG AQDGWRDVWR 
ETMTPGFRSI FHSNQAVEGI EQAIAFNAVL FEGFPRLEVV VENVTVEGDN VVVQARLTGA
QDGPFLGVPP SGQMVDVPDV TLFTLADGQV IEMRYFTDLL AVMTAISAPP EN