| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1287 |
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| Symbol | |
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| ID | 3933734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1248778 |
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| End bp | 1249794 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637903637 |
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| Product | ABC transporter related |
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| Protein accession | YP_509229 |
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| Protein GI | 89053778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAA TTGAACTGAG GGCGGTTGAA AAGTGGTTCG GGCAAGCGCA GGTCATCAAA
GGCGTTGATC TGACCATTGA GGAAGGTGAA TTCGTCATCT TCGTCGGGCC ATCGGGCTGT
GGAAAGTCTA CGTTGCTTCG GATGATTGCC GGGCTAGAGG AAACCTCGCG CGGGCAGATC
ATGGTTGGCG AGCGCGATGC CACGGCTGAA CCACCCAGTA AGCGTGGCCT GGCGATGGTC
TTTCAATCCT ATGCACTTTA TCCCCACATG TCGGTGCGCG ACAATGTCGG GTTTCCCCTG
AAATCCGCCG GACTGCCCAA GGCCGAGATC GACGCGAAGG TCAATGAAGC CGCCCGCGTT
TTGAAGCTTG ATAGTTACAT GGATCGTCGT CCAAAGGACC TTTCGGGTGG GCAGCGCCAA
CGCGTTGCCA TCGGACGCTC CATCGTGCGC GATCCCACAG CGTTCCTCTT CGATGAACCC
TTGTCTAACC TGGACGCTTC TCTCCGCGTG GAAATGCGCT ACGAGATCGC CAAACTGCAC
CAGACGTTGA AATCGACGAT GATCTACGTG ACCCATGATC AGGTTGAGGC GATGACGCTG
GCTGACAGGA TCGTGGTGTT GGAATTTGGC AAGATCGCGC AGGTCGGGAC ACCGCGTGAG
CTTTACGAGA GCCCTGCAAA TCTGTTCGTG GCTCAGTTCA TCGGTTCTCC TCGAATGAAT
GTGATGCCAG CGTCCGCTGT TCCGAGCCTA GGCATGCCGG AACAGGTCGT GTCCCTGGGC
GTCCGCCCGG AGCATATTTC ATTTGTGGAT GGGCCGGACG GGCACCTCCA CGGCACGGTC
GATGTCCTTG AGTATCTGGG CGCGGACACA TTCGTGATCA TGTCTTGCGG AGAGGCCGGA
CAGATTACGG TGCGGGTGAA CGGAGATGTC GACATGAAGC CGGGCGACAC GGCGGGCCTG
AATTTCCAAA AGGACAAAGT GCACGGCTTT GACGCAAGTG GCTTGGCAGT TGCCTAG
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| Protein sequence | MSSIELRAVE KWFGQAQVIK GVDLTIEEGE FVIFVGPSGC GKSTLLRMIA GLEETSRGQI
MVGERDATAE PPSKRGLAMV FQSYALYPHM SVRDNVGFPL KSAGLPKAEI DAKVNEAARV
LKLDSYMDRR PKDLSGGQRQ RVAIGRSIVR DPTAFLFDEP LSNLDASLRV EMRYEIAKLH
QTLKSTMIYV THDQVEAMTL ADRIVVLEFG KIAQVGTPRE LYESPANLFV AQFIGSPRMN
VMPASAVPSL GMPEQVVSLG VRPEHISFVD GPDGHLHGTV DVLEYLGADT FVIMSCGEAG
QITVRVNGDV DMKPGDTAGL NFQKDKVHGF DASGLAVA
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