| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1284 |
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| Symbol | |
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| ID | 3933731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1245059 |
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| End bp | 1246303 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637903634 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_509226 |
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| Protein GI | 89053775 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00128894 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACG TTCATCCACC ATCTGGCACC GGCCCACTTG CCAAGCGTGA AGCGCGTCTG
GCCTGGGGAT TACTGCTTCC GACGATAACG GCAGTCGCCA TTGTGGTGGT CTTGCCGCTT
CTCGCGATCT TTTGGATTTC CTTCAAACCT GTGTCGCTGT CAGATTTGCG AGCGCCCGAA
GCGGTTGTCC GTGAGGATTT TCGCGGCGGC CCGGAGATCG CCGGCGATGA AGCAACGATC
CGCTACCGGT TGCGCAATTC CTCGCAGGAC AGACCTATAC TTAACGTTTC GTTCATCGAT
ACGTTGCCAG AGGGTCTGAG CGCGCAATCG CTGGACGAGC GATGTGTCCT GGACGGCCGA
AACCTATCCT GTGTCTTTGG TGACTGGGAA CCGGGGTTCC GTGACACGCT GACCATTCCG
GTCGTGGTGG CGCAGGCTTA TTTCGATAAC GATGAGCGCC CGCGCGACAG TGATGCCCAG
ATTGTTGGGC AATCCTCCAA TGTGCTCACC AACGACGAAT TCACGCTGCA GAACTTCGCG
CGAATTTTCA ACGGAGATGA GTTTTTTGAG GTTCTGTGGG TCACGCTGTT CTACACCGTT
TTCGGCACAA TAGGCGCGCT CCTGGTTGGT CTGTTTGCGG CGCTGTTGCT GAACAAATCG
TTCAAAGGCC AGGGCATCCT CCGCGGACTT TACCTGTTTC CATACGTGGC ACCGGTGATT
GCCGTGGCCT TTGCCTGGTT GATCCTGTTC GATCCTTTTT CCGGCTCGGT CAATGCGCTG
CTGGTGCAAA TGGGTGTGTC CACAGAGGCC ATAAACTTCT TTGGAGAGCG CCCCTTGGCG
CTGATCATGG TGACGATATT TGAGATCTGG CGCTATTTCC CTTTGTCGTT TCTGTTCATC
CTAGCGCGGA TGCAAAGTAT CGATACGGAT ATGTACGAAG CCGCTGACAT GGACGGCGCG
TCGCCGTTTC AGCAATTTTG GTATCTCAGT GTGCCACAAT TGCTTGGCAT ACTCAGTGTT
TTGTTCCTGC TCCGCTTCAT TTGGACGTTC AACAAATTCG ATGACATCTT TCTTCTGACG
GGCGGCAATG CGGGCACCCG GACCCTGACG GTGAATGTCT ATGAACAGGC ATTCGCGATT
TCCAATATCG GTGCGGGCGC GGCTGTTGCC GTTGTGATCT TCGGATGCCT GCTGATGTTC
TCGATCGTCT TCCTCAAATA CATCAGCCGG GAGGAGGGTT TATGA
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| Protein sequence | MADVHPPSGT GPLAKREARL AWGLLLPTIT AVAIVVVLPL LAIFWISFKP VSLSDLRAPE
AVVREDFRGG PEIAGDEATI RYRLRNSSQD RPILNVSFID TLPEGLSAQS LDERCVLDGR
NLSCVFGDWE PGFRDTLTIP VVVAQAYFDN DERPRDSDAQ IVGQSSNVLT NDEFTLQNFA
RIFNGDEFFE VLWVTLFYTV FGTIGALLVG LFAALLLNKS FKGQGILRGL YLFPYVAPVI
AVAFAWLILF DPFSGSVNAL LVQMGVSTEA INFFGERPLA LIMVTIFEIW RYFPLSFLFI
LARMQSIDTD MYEAADMDGA SPFQQFWYLS VPQLLGILSV LFLLRFIWTF NKFDDIFLLT
GGNAGTRTLT VNVYEQAFAI SNIGAGAAVA VVIFGCLLMF SIVFLKYISR EEGL
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