| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1283 |
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| Symbol | |
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| ID | 3933730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1243620 |
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| End bp | 1244972 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903633 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_509225 |
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| Protein GI | 89053774 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000346676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.943264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AGACAAAATC ACTCATGCGG ACCGGCGTGG CGATGGCGTT GATCCTGTCG
GCTGCCTCAG CTCAGGCAGA GGATCTGCGG TTCTGGACCA CTGAAGAGCA GCCCGAGCGT
CTGGCACTTC AGGAAGAGAT GGCCGCTGCC TTCGCCGCCG CCTCGGGTCA TACGGTCCAG
GTTATTCCGG TAACGGAAAC CGATTTGGGC ACACGGGCCA CTGCTGCATA TGCGGCCGGA
GATTTGCCGG ACATCATTTA TCATCCGCTG CAATATGCCG GTCCATGGGC GGATGCTGGT
ATCCTGGATA TTGATGCCGC GACCGATGTG ATCGAAGTAC TGGGGGCGGG AACGTTCGCA
TCAGGTGCGC TGGACATGGC GGCTGTCGAC GGTGGCTATG CGTCCGTTCC GGTGGATGGC
TGGACACAGA TGATCGTCTA TCGCGCCGAT CTTTTCGAGG ATGCGGGCCT TGAGCCGCCA
AATTCTTACG CAAATGTGCT GGCTGCAGTA GAGGCGCTTC ATAACCCGCC AGAGATGTAC
GGTTTTGTCG CGGCGACCAA GATTGACGAG AACTTCATGA GCCAGGTTCT GGAACATGTC
TTCCTCGCCA ATGGCGTATC TCCTGTCGGA CCTGATGGCG TGCAGGAACT GGACGAAGCC
GCCACCATCG AGGTGTTGGA ATTCTACCGC GCCATCGCAG AAGCATCACC ACCTGGCGAT
CTTTATTGGG ACCAGTCGCG CACGCTTTAT TTCAGCGGCA ACGCGGCGAT GATCATCTGG
TCGCCGTTCA TCCTGGACGA GCTTGCAGGC CTCCGCGACA GTGCCCCGCC CACCATCAAT
GATGACCCGA CCTCCAGCGA TCTTGCAGCG GCAACCGGTA TTGTGACGAA CTTTTCCGGC
CCTTCCAATC CGGACGGCGC TGCGTGGGGA GATGTCCGGT ATTTCGGCAT CACCACTGAT
GCGGCCACGG ACGCAGCGAT GGAGTTTGTG ACGTATTCGA TGAACGAGGG ATATGGCGCC
ACCCTGGCGA TTGCGCCTGA AGGAAAATTC CCCGTCCGTC GCGGCACAGA AGAGAACCCG
ACCGAGTTCA CGGATCTTTG GGCCACGCTT GATGTCGGCG TCGATCGACG CGCGCCTCTG
GGTGACCTTT ATGAACAATC GATGATCGAC GAAATTGTCG GTGGTCTGGA TGTGGCACAG
CGTTGGGGTG TTGCGGAGGG TCAGTTGACC CTTGCGTCCA CGATCATCAA CTCGCAAGTC
ATTAATCGTC TGGTGCGCGA GTACCTTGAT GGTGAGCGAG ATGCGCCTGC GACGGTTGCG
GCCCTGAACG AGGCCATCGC GGCGGTTGAA TAA
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| Protein sequence | MKLKTKSLMR TGVAMALILS AASAQAEDLR FWTTEEQPER LALQEEMAAA FAAASGHTVQ
VIPVTETDLG TRATAAYAAG DLPDIIYHPL QYAGPWADAG ILDIDAATDV IEVLGAGTFA
SGALDMAAVD GGYASVPVDG WTQMIVYRAD LFEDAGLEPP NSYANVLAAV EALHNPPEMY
GFVAATKIDE NFMSQVLEHV FLANGVSPVG PDGVQELDEA ATIEVLEFYR AIAEASPPGD
LYWDQSRTLY FSGNAAMIIW SPFILDELAG LRDSAPPTIN DDPTSSDLAA ATGIVTNFSG
PSNPDGAAWG DVRYFGITTD AATDAAMEFV TYSMNEGYGA TLAIAPEGKF PVRRGTEENP
TEFTDLWATL DVGVDRRAPL GDLYEQSMID EIVGGLDVAQ RWGVAEGQLT LASTIINSQV
INRLVREYLD GERDAPATVA ALNEAIAAVE
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