| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1275 |
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| Symbol | |
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| ID | 3933721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1235564 |
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| End bp | 1236367 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903624 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_509217 |
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| Protein GI | 89053766 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.417665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC CTGCACTCGT AGACAGCCAC TGCCACCTGG ACTTCGACAG CCTCTCCGCA
GAGCTGCCGG ATGTCATCGC GCGCGCCTTG GATGCGGGCG TCACACGCAT GATAACCATC
TGTACCCGCT TGAAAAATAC GCCGCAGGTC CAGGCAATCG CCGAGGCCCA CGCGCCTGTC
TTCTGGGCCG GTGGCACCCA CCCGATGTCC GCCGCTGACG AGCCCATGGC GACGCTGGAT
CAGCTGGAAA CCTTGGCGCT GCACCCCAAG TTCGTGGGCA TCGGAGAGAC GGGGCTGGAC
TACCATTACA CCGCCGACAG CAAGGCCGTG CAGCAGGACA GCCTGCGCCT GCATATCGAG
GCCGCGCGGC GCACGAAGCT GCCCCTGATC ATCCATTCCC GTGATGCCGA CGACGACATG
GCGCGTATCC TGTCTGAAGA ACACGCCAAT GATGCGTTCA CCTGCGTCAT GCATTGCTTC
AGTTCAACCG CCGCACTGGC CCAGACGGCG CTGGATCTGG GCTTTTATCT GTCCATGTCC
GGCATCACCG CCTTCCCCAA GTCTCAGGAA TTGCGCGATA TTTTCAGGAG CGCCCCGCTG
GATCGCATCC TTGTGGAAAC CGACAGCCCC TACCTCGCCC CGCCGCCCCA TCGCGGCAAA
CGCAATGAGC CCGCCTTCAC CGCCCACACC GCGCGGGCAG CGGCGGAGAC CTTTGGCGTC
AGCTACGCAG ACTTCGCGCG CCAGACGACC GAGAACTTCG ACCGCCTGTT CTGGAAAGCC
GCACCGGGGC CCAGCAATGG CTGA
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| Protein sequence | MSTPALVDSH CHLDFDSLSA ELPDVIARAL DAGVTRMITI CTRLKNTPQV QAIAEAHAPV
FWAGGTHPMS AADEPMATLD QLETLALHPK FVGIGETGLD YHYTADSKAV QQDSLRLHIE
AARRTKLPLI IHSRDADDDM ARILSEEHAN DAFTCVMHCF SSTAALAQTA LDLGFYLSMS
GITAFPKSQE LRDIFRSAPL DRILVETDSP YLAPPPHRGK RNEPAFTAHT ARAAAETFGV
SYADFARQTT ENFDRLFWKA APGPSNG
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