Gene Jann_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1272 
Symbol 
ID3933718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1232783 
End bp1233838 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content64% 
IMG OID637903621 
Producthypothetical protein 
Protein accessionYP_509214 
Protein GI89053763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.637281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCTATT CGATTTACAT GCTGCCCGAA GGCTTGATGA CCGTGACCGG CACCAATGGG 
GGCAACGGTC TGGATGGTCA GAACCAGGGC TCGGGCGTGC ATCTTTCACC CACATCCACC
ACGCCGGGTG CGACGATCAC GCTCAATTCG AATGCGTGGC AAGAGATTGA GATCAACGAC
AATGACACCA GTTTTGGTGA CAATGACGGC GGCCAGCGGC TGGTGAACTC GGAAACGGTG
GAGACATCGC CGGGTGTGTT CGAGACCTTC AACGTCAACA CCAGGGTAGA GGCGGAATAT
TCCATCGTCG TCGAAGACCC TGGTGGGGTG CAATACACGC TGGCGGCGTT CAACTTTTCC
ACAGGGTCTC CGTCATACGG AACCGTGGAG GGCTTGGCGT TTATCGGCCC TCAGGGGGGC
TTCCCGCCAA TCGGCGTGCC GCTGACTGTT GTCTCGAACC AGGAAGGTCC CAACTTCGAT
GAAGCGACCT ATGCCACCCC GATTTGCTTC GCCCAAGGGA CACTGATTGC CACGCCCGAC
GGCGATGTCG CGGTGGAGGA GCTGGCAGTC GGGGGGCTGG TCAGCACCGT CGAGCATGGG
GCCGAGCCAA TCCGGTGGAT CGGCCGTAAG ACCTTCCCCG CAAGGGGCGC CTTCGCGCCG
GTGGAATTCG CGCCGGGTGC CATTGGCAAC ACGCGGCGTC TGCGCGTCTC TCGCCAGCAT
CGTCTGCTGT TGACCGGCTG GCGGGCCGAG CTGTTGTTCG GCGAAGAGGC GGTGTGGGTC
CCCGCGGCCT ATTTCCTTGA TCGTCCCGGC GTGCGTGTGG CGGAGGGCGG GGAGGTCACC
TATTTCCACG TCTTGCTGGA CGGTCACAGA ACGCTTCTGG CCGAAGGGGT GGAGGCGGAA
AGCCTGCACC CCGGCGACAT CGCGCTTTGC GGCATGGGGG CATCGGCGGA AGCGGAACTC
TTCGCGATGT TCCCGGAGCT GGAGAGGCTG CGCACCCGCA CCATGTCGCG CCCCGCCGTC
CGCGCGATTG AGGCGCAGGT TGCCCTCGCC AACTGA
 
Protein sequence
MPYSIYMLPE GLMTVTGTNG GNGLDGQNQG SGVHLSPTST TPGATITLNS NAWQEIEIND 
NDTSFGDNDG GQRLVNSETV ETSPGVFETF NVNTRVEAEY SIVVEDPGGV QYTLAAFNFS
TGSPSYGTVE GLAFIGPQGG FPPIGVPLTV VSNQEGPNFD EATYATPICF AQGTLIATPD
GDVAVEELAV GGLVSTVEHG AEPIRWIGRK TFPARGAFAP VEFAPGAIGN TRRLRVSRQH
RLLLTGWRAE LLFGEEAVWV PAAYFLDRPG VRVAEGGEVT YFHVLLDGHR TLLAEGVEAE
SLHPGDIALC GMGASAEAEL FAMFPELERL RTRTMSRPAV RAIEAQVALA N