| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1267 |
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| Symbol | |
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| ID | 3933713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1227800 |
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| End bp | 1228915 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637903616 |
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| Product | polyamine ABC trasnporter, periplasmic polyamine-binding protein |
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| Protein accession | YP_509209 |
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| Protein GI | 89053758 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.469516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.704416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCA AGAGCCTTAT GCTCCTGACA ACCGGCGCCA GCATGGCCGC CACCGGCGCG
ATGGCCGACG GCCACATGGC CAGTTCCATG ACCCTCGTGT CCTGGGGCGG CGCCTATCAG
GCCAGCCAGA CCAACGCCTA TTCCGATCCC TACGCCGCCA TGCATGACGG TCTGGAGATC
ATCTGGGACG AAAGCTCGGC CGAGGCCGTG GCCCGTCTGC GCGCCATGAA CGAGGCGGGC
AACATCACCT GGGACCTCGT GGACGTTGTG GCCGCTGACG CCATCCGCCT CTGCGACGAA
GGTCTGGCGA TGGAAATCGA CCATGACGAG ATGCTGGCCC CGGCCCCCGA TGGTACGCCA
GCGTCCGAGG ATTTCGGCGA TCTGATCGTG TCCGACTGCT TCATCCCGCA GATCGTGTAT
TCCACCACGG TGGGGTATCG CACGGACGTG GCAGAGTGGA ACGGCAACAC GCCGTCCGAC
ATCTGCGCGA TTTTCGATAC CGAAGCGTTC CCCGGTCAGC GGTCGCTGGA GCGTCGTCCG
ATCGGCAACC TGGAATGGGC GCTGATCTGT GACGGCGTCG CGATGGAAGA TGTCTACGAC
GTGCTTGAGA CGGAAGAGGG TGTGGAGCAA GCCTTCGCAA TGCTCGACAC GATCCAGGAC
CAGACCGTTT GGTGGTCCGC CGGTGCAGAC ACGCCCCAGC TTCTGGCTGA CGGCGAAGTT
GTCATGGGCT CCACCTATAA CGGTCGTTTG TTCTCTCTGA TCGAGGAGCA GGACCAGCCC
GTCGCCATGC TGTGGGACGC GCAGGTGTTC GACCTTGACG GTTGGATCAT CCCCGAGGGG
CTGCCCGAGG ATCGCCTGGC CCGTACGCTG GACTTCGTGC GCTTCGCCAC GGACACACAG
CGTCTGGCCG ATCAGTCGCG CTGGATCTCC TACGGTCCCG CACGCGCCTC TTCCGCGCCT
CTGGTTGGCA CGCATGCCGA TCTGGGCATC GAGATGGCAC CGCATATGCC AACCGACCCG
GCCAATGCCG AGCGGACGTT CCTGTTCAAC TACGAGTGGT GGGCCGACTA CCGCGACGAC
ATGGACGCCC GTTTCCAGGC GTGGTTGGCG CAATAA
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| Protein sequence | MNLKSLMLLT TGASMAATGA MADGHMASSM TLVSWGGAYQ ASQTNAYSDP YAAMHDGLEI
IWDESSAEAV ARLRAMNEAG NITWDLVDVV AADAIRLCDE GLAMEIDHDE MLAPAPDGTP
ASEDFGDLIV SDCFIPQIVY STTVGYRTDV AEWNGNTPSD ICAIFDTEAF PGQRSLERRP
IGNLEWALIC DGVAMEDVYD VLETEEGVEQ AFAMLDTIQD QTVWWSAGAD TPQLLADGEV
VMGSTYNGRL FSLIEEQDQP VAMLWDAQVF DLDGWIIPEG LPEDRLARTL DFVRFATDTQ
RLADQSRWIS YGPARASSAP LVGTHADLGI EMAPHMPTDP ANAERTFLFN YEWWADYRDD
MDARFQAWLA Q
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