| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1260 |
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| Symbol | |
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| ID | 3933706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1218977 |
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| End bp | 1219855 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903609 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509202 |
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| Protein GI | 89053751 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGT TCAATTATCA CCATTTGCGA TACTTCTGGG CGGTCGCCCA TGACGGCAAC
CTCACGCGGA CGGCGGCGCG GCTCAACCTG TCGCAATCTG CCGTCTCCGT TCAGATCAAG
CAGCTTGAGG CGTCCCTGGG GCATCGGTTG TTTGAGCGGC GCGGTCGTCA GCTTGTCCTG
ACCGAGGCGG GCCGGATCGC GCTGGATCAT GCGGATGCAA TCTTTGCCGC GGGGCGCGAG
TTGATTGGCA CGCTTCAGGA AAAAGACCGT AGCCGCCAAG CCATCCGGAT CGGCGCGTTG
GCGACCCTGT CGCGCAATTT TCATCTGAAG TTTTTGCAAC CCATCCTTGG CCGGCAGGAT
GTGGAGATCA TCCTGCGCTC CGGCACGAAT GTGAACTTGT TGCAGGCGCT GGAAGCGCAC
AATCTGGACG TGGTCCTGAT CAATCGCCCG CCTTCGCGCG ACGCCATCAC GCCATTCGTG
TCCCACCGCC TGTCCGAGCA GCCGGTCAGC CTGGTGGGCA CGCCTGCTTT GCTGGGAGAT
ACGCCTGATC TGAATGACCT GCTGGCCCAT CAGCCGATCA TCCTGCCCAC CGCCGACACC
GACGTGCGCA TTGGATTTGA CGCGCTCACC GAGCGGATCG GCATCCGGCC CCAGATCGTC
GCGGAGGTCG AGGACATGGC GATGATGCGC CTTCTCGCGC GGGAGGGGGT TGGTCTGGCG
GTCCTGCCGC CTATCGTGGT CCAAGACGAG CTGAAAACCG GACGGTTGAT TGAGGCGGAC
CGTCTTCCCG GCATTGGTGA GACGTTCTAT GCGGTCACCC TGACACGCCG TTTCCCGAAC
CCGCTGCTGT CGGAATTGCT GGAAGACCGC GCGTTGTAG
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| Protein sequence | MAEFNYHHLR YFWAVAHDGN LTRTAARLNL SQSAVSVQIK QLEASLGHRL FERRGRQLVL
TEAGRIALDH ADAIFAAGRE LIGTLQEKDR SRQAIRIGAL ATLSRNFHLK FLQPILGRQD
VEIILRSGTN VNLLQALEAH NLDVVLINRP PSRDAITPFV SHRLSEQPVS LVGTPALLGD
TPDLNDLLAH QPIILPTADT DVRIGFDALT ERIGIRPQIV AEVEDMAMMR LLAREGVGLA
VLPPIVVQDE LKTGRLIEAD RLPGIGETFY AVTLTRRFPN PLLSELLEDR AL
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