| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1259 |
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| Symbol | |
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| ID | 3933705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1217313 |
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| End bp | 1218872 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637903608 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_509201 |
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| Protein GI | 89053750 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.565497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTATCG CCTTCCTGCC CCTTGTGGCC CCGGTCGTCT TTGTCGGTCT CGCGGCCATC
GCGTTTCGTG GACCGCAGAT GCGCCCGACA GCGGTGTTAA GACAGGTCGA AATCGGCGCG
CTGGGTGTCC TGGCCCTGGC TGCGTTGGCG GCTTTGATGC TTATCCTGAC AGGCCCGGGG
ACCAGCCCTC TGATCGGTGC GAACGGTCTT GGACTATCCG CGCGGCTCGA TGCGATCAGC
GGTGTTATGC TGTTGCTGGT CGCGTTCGTG GGCTGGGTCG TGGTGCGCTA TTCCGCAACA
TATATGGACG GCGAAGCGCG GCAGGGGCCC TTTACCGGCT GGCTATGCCT CACGCTCGCG
GCTGTGATGC TGCTGGTGAT ATCCGGCAAC CTTCTGCAAT TTGCCCTTGC GTGGATCGCC
ACCAGTCTGT CGCTGCACAA GCTGCTGCTG CATTACCCTG AGCGGGTTGC AGCCCGGCGG
GCGGCGCGCA AGAAATGGAT CACCGCCCGG CTGGGGGACG CCGCGATGCT GGCGGCGATG
ATCCTGATCT TCATCACCTA TGAAACGGGT GATCTGGCAA CCATTCTGGA CGCAGCGCGC
AGCGGTCAGG GCAGCGAGCT GGCCACGTGG ATCGCCGCCG CCCTCGCCCT CGCGGCCATC
CTGAAATCCG CGCAATTCCC GATGCACGGC TGGCTGACCG AGGTGATGGA GACGCCAACG
CCGGTATCCG CGCTGCTGCA CGCAGGCGTC ATCAATGCGG GCGGCTTCCT GTTGATCCGC
TTTGCCGACG TGATGCTGCT GTCGCCGGGC GTGCTGGCGG TGCTGGTGAT GATCGGCGGG
TTCACGGCGC TTTTCGGCGG TCTGGTGATG CTGACGCAAT CGGCGGTCAA AACCTCCCTC
GCGTGGTCCA CGGTGGCGCA GATGGGGTTC ATGATCCTGC AATGCGGTCT GGCGCTGTTC
CCGCTGGCGC TGCTGCATAT CGTGGCGCAT TCGATGTATA AGGCGCATGC CTTTCTTGCC
TCTGGCGGTG CCGTGGACGG CGTCGCCGCG ATCCGCAGGC CGGGCCCCGT CGCGATCCCC
AACGGCGGGG CGGTGGGGCG CGCGTTTCTG ATCGCGCTGG TCATCTACGG CGCGGTCGGG
CTGATCTTCG GCCTGACGGG CAAGTCGCCG CAAGCCATCG CCCTGGGCGC GATCCTGATC
TTCGGCGTGG CGTATCTTTT GGCGCAAGGC CTGGCCGACG CAGCCCCGCG TGTTCTGACG
CAACGCACCG CAGCCTATTC CGTCGCAGCG GCGGTGGGTT ACTTTGCCCT GCAAACCGCA
GCCGAGTGGC TGATGGCAGG CACCCTTCCC GCCACGCCCG CCCCCGGCCC GCTGGAATGG
GCGTTGATCG TGCTGGCCGT GCTCAGCTTT GGGGTGGTGG CGGTGGCGCA GGCGATGTTC
CCGCTCTGGG CCTATCACCC CGCCGCGGCC GGATTGCGGG TGCATCTGTC CAACGGGCTG
TATGCCAATG CCGTCTTCGA CAAGCTTCTG GGTGGCTGGA CCACCGAAAA CCGCTCCTGA
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| Protein sequence | MFIAFLPLVA PVVFVGLAAI AFRGPQMRPT AVLRQVEIGA LGVLALAALA ALMLILTGPG
TSPLIGANGL GLSARLDAIS GVMLLLVAFV GWVVVRYSAT YMDGEARQGP FTGWLCLTLA
AVMLLVISGN LLQFALAWIA TSLSLHKLLL HYPERVAARR AARKKWITAR LGDAAMLAAM
ILIFITYETG DLATILDAAR SGQGSELATW IAAALALAAI LKSAQFPMHG WLTEVMETPT
PVSALLHAGV INAGGFLLIR FADVMLLSPG VLAVLVMIGG FTALFGGLVM LTQSAVKTSL
AWSTVAQMGF MILQCGLALF PLALLHIVAH SMYKAHAFLA SGGAVDGVAA IRRPGPVAIP
NGGAVGRAFL IALVIYGAVG LIFGLTGKSP QAIALGAILI FGVAYLLAQG LADAAPRVLT
QRTAAYSVAA AVGYFALQTA AEWLMAGTLP ATPAPGPLEW ALIVLAVLSF GVVAVAQAMF
PLWAYHPAAA GLRVHLSNGL YANAVFDKLL GGWTTENRS
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