| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1257 |
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| Symbol | |
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| ID | 3933703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1213920 |
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| End bp | 1214801 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903606 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_509199 |
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| Protein GI | 89053748 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.798297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGAC AATTCGAACA GGCAATCCTC GCGCTCATGA TCTTTGTGAT CATGCTTGGC
ATGGGGGCAT CGCTGACGCC GCGTGATTTC ATCCTCGCGC TCAAGCGCCC CTATGGGCTG
ATGATCGGGG TCGTGTCGCA ATACGGGTTC ATGCCGTTCA TCGGGTTCAT CCTTGCGCTG
ACCTTGCCGG TGTCCGATCC GATCAAGATC GGCATCCTGA TCATGTCTTG CATGCCGGGC
GGGACCACGT CCAATATCTT CACCTACTTT TCCAAAGGGA ACCTGGCGCT TTCTGTTCTC
ATGACGGTCA CGTCGACGAT CTTTGGCGTG ATCCTGATCC CCATCGTGCT GGTCGTTTAT
GCGGGCGCTT TGGACGTGGA TATCCCGCGC GAAAATATCA TCGCGACCCT TGTGCTGCTG
CTGGTGCCCG TGGCCATCGG CATGGTGCTG CGCAAGCTGA ACGCGAATAT CGGCGCGGTG
ACGGAATTCA TGGGATCCAT GTTGGCGATT TTCTTCATCC TGTTTCTGGT CGTCTCGTGG
ATCCCGCGCA ACTTCGCGTT TCTGATGGAG ACGGGATGGG CGACCTATGC GGCCTCCATC
GCGCTGGGGC TGATTGGCAT CACGGTGGGA TATCTCTTTG CCAAGGCCCT GAAGCTGCAT
CCCCGCAATG CCCGCACCGT GGGTCTTGAG ACGGGGATAC AGAACGGCCC CCTGGCCATC
GCGATCATCG CCTTCACCTT TTCGGGGGCG GAGCAGCAGG CGGTCAATGC GGTGCCTGTC
CTCTACTCCC TGTTCATCGT GATCGTCTCG ACATTGGTGA CACTCTACTT CCGGCGCGCC
AATACGTCTG CCGAGCAAAA GATGCCCGAC AGTCTGTTGT AG
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| Protein sequence | MVGQFEQAIL ALMIFVIMLG MGASLTPRDF ILALKRPYGL MIGVVSQYGF MPFIGFILAL
TLPVSDPIKI GILIMSCMPG GTTSNIFTYF SKGNLALSVL MTVTSTIFGV ILIPIVLVVY
AGALDVDIPR ENIIATLVLL LVPVAIGMVL RKLNANIGAV TEFMGSMLAI FFILFLVVSW
IPRNFAFLME TGWATYAASI ALGLIGITVG YLFAKALKLH PRNARTVGLE TGIQNGPLAI
AIIAFTFSGA EQQAVNAVPV LYSLFIVIVS TLVTLYFRRA NTSAEQKMPD SLL
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