| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1256 |
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| Symbol | |
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| ID | 3933702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1212170 |
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| End bp | 1213891 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903605 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_509198 |
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| Protein GI | 89053747 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.590511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT CAAACCGTCC ATGGACTGCA TATTACGGCC CGTCCATGCG GACCGAGATC
GAGACCGCGC AGTTCCGCAC GATCGGCGAC ATGATTGCCG CCGTTTCGCA TCTGTATAAG
GATCAGCCTG CGTTCACGGC CTGTTTGCCC AACGGGATGA ACGGCACGCT GACCTTCAGC
CAGGTCGACG AGATGTCCGA TGGGCTGGCG GTCTATCTGC GCGAAACGGC GGGCCTGAAG
CAGGGCGACC GTGTTGCGGT GCAAATGCCC AACGGGTTGT CCTTCCCCGT GGCCGCATTC
GCGATCCTGA AGGCCGGGTG TGTCCTGGTG AACGTAAACC CGCTCTATAC GGCCGAGGAA
ATGGCGCATC AATTCGCGGA TGCCGAGCCC AAGGCGCTGA TCGTTGTGGA TATCTTTGCC
GATAAGTTGA CCCAGGCCCT CAAGGGGCAC CCGATCCCCA ATATCATCGT CACCCAGGTG
GCCGAGTTCT TTCCGGCCAT GCCACGCGGG ATCGTGCGGC TGGTCCAGAG GCATTGGGAC
CGCACCCTTG CGCCGATCAC CCTGCCGCAT ATCCGGCTGC CGGACGCGAT TGAGGCGGGC
AAACAGGACA GCGCGAGCAA AAGCATATCC GCCGAAGGAT ATCGCAGTGC GCTGTCGTCA
GACGATATCG CCTGCCTGCA ATATACCGGA GGCACCACGG GCGTGCCCAA GGGTGCGATG
CTGACCCATG CGAACCTGAT GATGAACATG GAACAGACCA TGGAGATGAT CAGCAACGTC
GAGAAGGGCC GGGAGGTCGC GCTGACGGCG CTGCCGCTCT ATCATATCTT TGCGTTCACG
GTGAATTTGC TGGGGTTCTA CTATCTGGGG GCCCGCAACG TCCTGATCCC CAATCCGCGC
CCCCTCAGCA ACCTCAAGCG GGCGTTCGAG AATTATCCGA TCACGTGGAT GAGTGGTGTG
AACACGCTGT TCAACGGTCT CAGCAAGGAG GTTTGGTTCC AAGACACGCC GCCCAAACAC
CTGAAATTCG CCTCTGCCGG TGGCATGGCG CTGCAAAGCT CCGTCGCCGA ACGGTGGGAG
GAGGTCAGCG GCAAGCCGGT GCTGCAAGGC TACGGGCTGA CGGAATCCTC TCCGGTCATG
ACCTTCAATC CCCTGGGCAA GACCCGCCCC GGCTCCATCG GTATCCCGGT CCCGTCGACC
GAGCTGCGCT GTCTGGATGA TGACGGCACC GAAGTGCCCC AGGGTGAGGC CGGAGAGATC
GCGGCGCGCG GCCCCCAGAT CATGAAGGGC TACTGGAACA AGCCCGAGGA GACGGCCAAA
ACGATGCACG GAGACTGGCT TCTGACCGGC GATATCGGTG TCATGGATGC GGATGGATAT
TTCTCCATCG TGGATCGCAA GAAGGACATG GTGCTGGTCT CGGGTTTCAA CGTCTACCCC
AACGAGATCG AAGATTGCCT GGTCCGCCAC CCCGGGATCA TGGAGGCTGC GGTGATCGGC
GTGCCTGACG GTGCGTCGGG CGAGGCGGTC AAGGCGCTGG TGGTGTTGCA TGACCAGACG
CTGACGCCGG ACGCCATCCG CGCCTACTGC AAAGAGCATC TGACCGCCTA CAAAGTTCCC
AAAGCGGTCG AATTCCGCGA CGATCTGCCG AAATCGAATG TCGGTAAGAT CCTGCGCAAG
GATCTGCGGT CGGAACAGGC CCCACTGCGC GATGCGTCCT AG
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| Protein sequence | MSQSNRPWTA YYGPSMRTEI ETAQFRTIGD MIAAVSHLYK DQPAFTACLP NGMNGTLTFS
QVDEMSDGLA VYLRETAGLK QGDRVAVQMP NGLSFPVAAF AILKAGCVLV NVNPLYTAEE
MAHQFADAEP KALIVVDIFA DKLTQALKGH PIPNIIVTQV AEFFPAMPRG IVRLVQRHWD
RTLAPITLPH IRLPDAIEAG KQDSASKSIS AEGYRSALSS DDIACLQYTG GTTGVPKGAM
LTHANLMMNM EQTMEMISNV EKGREVALTA LPLYHIFAFT VNLLGFYYLG ARNVLIPNPR
PLSNLKRAFE NYPITWMSGV NTLFNGLSKE VWFQDTPPKH LKFASAGGMA LQSSVAERWE
EVSGKPVLQG YGLTESSPVM TFNPLGKTRP GSIGIPVPST ELRCLDDDGT EVPQGEAGEI
AARGPQIMKG YWNKPEETAK TMHGDWLLTG DIGVMDADGY FSIVDRKKDM VLVSGFNVYP
NEIEDCLVRH PGIMEAAVIG VPDGASGEAV KALVVLHDQT LTPDAIRAYC KEHLTAYKVP
KAVEFRDDLP KSNVGKILRK DLRSEQAPLR DAS
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