| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1250 |
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| Symbol | |
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| ID | 3933695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1204641 |
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| End bp | 1206527 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903598 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_509192 |
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| Protein GI | 89053741 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.390629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.863457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG CCACCCTCAC AGGGAATGAC GGCCACGACC GGCCCGGGTT CTTCACCCGT
TGGTTCATGT CGACCAACCA CAAAGACATC GGCATCCTTT ATCTGTTCAC CGCAGGCCTT
GTGGGCCTCG TCTCGGTGGC CTTCACCGTT TACATGCGGA TGGAGCTGAT GGAGCCGGGC
GTGCAGTACA TGTACGACGC CTTTGCTGCT TCCCCTGAGG GTATCTCGGC GCTCTTTGAA
CGTCTGGGTG AGGCTCTGGC CGCCGCCGGT GGCGGGACCA ATGCCTTCGC TGATCAACTG
GCGACAATGG AAAGCACCCT GACCGCTGCC GGGGGTGAAA CCATTGAAAT CACGGGTGGA
ATGCGCGCCG ATATGGTCGC CGGGTTCGAA TCTATGCTCG CCACCGCCAA CCCGGCCGAG
GCTCAGGCCC TGTTGGGCAC AATGGACCAG CTGGACGGCA ACCCCGATGG CCATCTGTGG
AACGTTCTGA TCACCGGTCA CGGCGTGTTG ATGATGTTCT TCGTCGTCAT CCCGGCGCTG
TTCGGCGGCT TCGGCAACTA CTTCATGCCG CTGATGATCG GCGCACCGGA CATGGCGTTC
CCGCGCCTCA ACAACCTCTC CTACTGGATG TATGTCGCGG GCACCTGCCT CGCCTTCTGC
TCCGTCATGA TTGACGGTGG CGCGGGTCCG GGCTGGACGT TCTACCCGCC GATTTCCGCG
CAGGGCGTTG AAACCTCCCG CGCCGTGGAC TTCGCGATCT TCGCCGTCCA CGTCTCGGGC
GCCTCGTCGA TCCTCGGCTC GATCAACTTC ATCACGACCT TCCTGAACAT GCGCGCGCCC
GGCATGACGC TGCACAAGGT GCCGCTTTTC GCCTGGTCCG TGTTCGTGAC CGCCTGGTTG
CTTCTGCTGT CCCTGCCGGT TCTGGCCGGG GCCATCACCA TGCTGCTGAC GGATCGCAAC
TTCGGCACCA CTTTCTTCGA CCCCGCCGGG GGCGGTGACC CGATCCTGTT CCAGCACATC
TTCTGGTTCT TCGGCCACCC CGAGGTTTAC ATCGTGATCC TACCCGCCTT TGGCGTGATC
TCCCACATCG TGGCGACCTT TTCCAAGAAG CCGATCTTCG GCTATCTGCC GATGGTCTAC
GCGCTGGTGG CCATCGGGGG TCTGGGCTTC GTCGTCTGGG CGCACCACAT GTACACGGTG
GGCATGACGC TGACGCAGCA GGCCTATTTC ATGGTGGCCA CAATGGTGAT CGCGGTGCCC
ACGGGCATCA AGATCTTCTC CTGGATCGCG ACGATGTGGA TGGGGTCGAT CAGCTTCAAG
ACCCCGATGA TGTTCGCCCT TGGCTTCATC TTCCTCTTCA CCCTCGGCGG CACGACGGGC
ATCATCCTGT CGCAAGCCGG TGTGGACCGC GCCTACCACG ACACCTATTA CGTCGTCGCG
CACTTCCACT ATGTGATGAG CCTTGGGGCC GTCTTCGGGA TCTTCGCCGC CGTCTACTAC
TGGATCGGCA AGATGTCGGG CCGCCAATAC CCGGAATGGG CCGGACAAGT TCACTTCTGG
GTGTTTTTCA TCGGCACCAA CATCACCTTC TTCCCGCAGC ACTTCCTGGG CCGCCAGGGC
ATGCCGCGCC GCTATATCGA CTACCCGGAT GCCTTCGCGC TCTGGAACTA TGTGTCGTCC
ATCGGTGCGT TCATCTCCTT TGCATCGTTC CTCTTCTTCA TCGGCATCGT GTTCTACACG
CTCTTCGCCG GGAAGCGCGT CACCCAGCCC GCCTATTGGG GCGAGCATGC CGACACGCTG
GAATGGACCC TGCCCAACCC GCCCCCGGAG CACACGTTTG AGGAGCTTCC CACCCGCGAG
ATGTGGGACA AGCAACCGGG TCACTGA
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| Protein sequence | MADATLTGND GHDRPGFFTR WFMSTNHKDI GILYLFTAGL VGLVSVAFTV YMRMELMEPG
VQYMYDAFAA SPEGISALFE RLGEALAAAG GGTNAFADQL ATMESTLTAA GGETIEITGG
MRADMVAGFE SMLATANPAE AQALLGTMDQ LDGNPDGHLW NVLITGHGVL MMFFVVIPAL
FGGFGNYFMP LMIGAPDMAF PRLNNLSYWM YVAGTCLAFC SVMIDGGAGP GWTFYPPISA
QGVETSRAVD FAIFAVHVSG ASSILGSINF ITTFLNMRAP GMTLHKVPLF AWSVFVTAWL
LLLSLPVLAG AITMLLTDRN FGTTFFDPAG GGDPILFQHI FWFFGHPEVY IVILPAFGVI
SHIVATFSKK PIFGYLPMVY ALVAIGGLGF VVWAHHMYTV GMTLTQQAYF MVATMVIAVP
TGIKIFSWIA TMWMGSISFK TPMMFALGFI FLFTLGGTTG IILSQAGVDR AYHDTYYVVA
HFHYVMSLGA VFGIFAAVYY WIGKMSGRQY PEWAGQVHFW VFFIGTNITF FPQHFLGRQG
MPRRYIDYPD AFALWNYVSS IGAFISFASF LFFIGIVFYT LFAGKRVTQP AYWGEHADTL
EWTLPNPPPE HTFEELPTRE MWDKQPGH
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