| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1243 |
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| Symbol | |
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| ID | 3933688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1198126 |
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| End bp | 1198767 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903591 |
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| Product | pyrimidine 5-nucleotidase |
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| Protein accession | YP_509185 |
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| Protein GI | 89053734 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.882257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.476279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGC TCACCGATAT CGACACCTGG GTCTTTGACC TCGACAACAC CCTGTACCCG
CCCGACATGG CCCTGTTTCC GCAGGTCAAT GCCAGGATGG CGGCCTATGT GCGCGACACG
CTCGGCGTGT CCCTGACCGA GGCGGAGGCC CTGCGCCACC AGTATTATAT CGAGCATGGC
ACGACGCTTG CGGGCCTCAT GGCGTATCAC GACATCGATC CGGATCCCTA CCTTGTGGCC
GTCCACGACA TCGACTTCTC GGTCCTGTCA CCGGACCCCG CACTGGCCGA TGCGATCAAA
GCGCTGCCCG GGCGCAAGAT CATCTACACC AACGGCACCG CCCCCTACGC GGAAGCCGTC
GCAAGCGCGC GGGGTCTGGA TGGGCTGTTT GATGCGATCT ACGGGGTGGA GCACGCGGAT
TATCACCCAA AACCCTCGGC GGAGGCGTTC GACACCGTCT TCGGGAAAGA GGCGCTGACC
CCGACCAAGG CCGCGATGTT CGAGGATGAA GCGCGCAATT TGCGCGTCCC CCATGCGCTT
GGCCTGACGA CGATCCACGT GGCGCCTGAA CCCCTACGCG ACGATTTCAT CCACCATGGT
ACGGCGGATC TGGGGGATTT TTTGCGCCGC CTGCCTGTCT GA
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| Protein sequence | MAQLTDIDTW VFDLDNTLYP PDMALFPQVN ARMAAYVRDT LGVSLTEAEA LRHQYYIEHG
TTLAGLMAYH DIDPDPYLVA VHDIDFSVLS PDPALADAIK ALPGRKIIYT NGTAPYAEAV
ASARGLDGLF DAIYGVEHAD YHPKPSAEAF DTVFGKEALT PTKAAMFEDE ARNLRVPHAL
GLTTIHVAPE PLRDDFIHHG TADLGDFLRR LPV
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