Gene Jann_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1242 
Symbol 
ID3933687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1196814 
End bp1198019 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content69% 
IMG OID637903590 
Product2-octaprenyl-6-methoxyphenyl hydroxylase 
Protein accessionYP_509184 
Protein GI89053733 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.974106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.764271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG TGCAGAACAT CGATATCTTT GTTTCCGGCG GTGGCGTGGC GGGCCTTGCG 
GCCACCATCG CTTTTGCGCA GGCGGGTTTT TCCACCCTTT GCGCGGACCC CGCCCCGCCG
ATCACCGAAC GCGAAGAGGC GGGTGCCGAC CTGCGCACAA CCGCGTTCCT GCAACCGGCG
AAGGCCTTTC TGGACACAAT CGGCCTTTGG TCCGTGTTCG CGCCCCATGC CACTCCGCTG
CAGGTCATGC GCATCGTGGA TGCGGGCGGC GCGCTGCCTG AACCGCGTGC GAGCCATGAT
TTCAACGCCT CCGACATCTC GGACCAGCCC TTTGGGTGGA ACCTGCCCAA CTGGCTGCTG
CGGCGGGAGA TGGTGGCCCA TATCGCGCAC TTGCCCGGCG CGGATTTTCG GCCCGGCACC
GGCACCGCCC ACGTCCTGAC CCGCGAGGCC GAGGCGCGCG TGAGCCTCAG CGACGGCACC
CGTCTGCGCG CGAAGCTGAT CGTCGCCGCC GATGGCCGCG CCTCCCCGGT GCGCGAGGCG
CTGGGGATTG ATGTCACCAC CACGCGCTAT GGCCAGAAGG CGCTGGCGTT TGCGGTCACG
CACGCCGCCC CCCACGACAA CATCTCGACC GAGATCCACC GCACCGGTGG GCCGTTCACG
CTTGTTCCGC TGCCGGATCA CGAAGGGCGG CCTTGTTCCG CCATCGTCTG GATGGATCGC
GGGCCGGAGA TTGCCCGTCT GGCGGACCTG CCGGAGCCTG CGTTTGAGGC AGAGATGACG
ACCCGCTCCG CCAATCTGTA CGGCCCCCTC AAGCTGGCGT CGCGCCGCAC GGTCTGGCCG
ATCATCAGCC AGATCGCCGA CCGAATGGTG GGGGAACGCA CGGCGCTGGT GGCAGAAGCC
GCCCATGTGG TGCCGCCCAT CGGCGCGCAG GGGCTCAACA TGAGCCTGGG CGATATCGCC
GCGCTGCTGG AGATCGCCCG CGCCCATCCC GAAGATCCCG GCGCGGCGAA GGGGCTGGCC
CGCTACGCCC GTGCCCGGCA CACCGAGGTC AAAGCCCGCG TGACCGGAGT GGACGCGTTG
AACCGCGCTT CGATGGCAGA CGCCCAAGGC TTGCGCGACA TGCGGCTGCG GGCGTTGAAC
GGGCTTTATT CCGTCGCCCC CGTCCGCCGC GTATTGATGC GCGCAGGCCT CGGCGCGTCG
GGGTAG
 
Protein sequence
MTDVQNIDIF VSGGGVAGLA ATIAFAQAGF STLCADPAPP ITEREEAGAD LRTTAFLQPA 
KAFLDTIGLW SVFAPHATPL QVMRIVDAGG ALPEPRASHD FNASDISDQP FGWNLPNWLL
RREMVAHIAH LPGADFRPGT GTAHVLTREA EARVSLSDGT RLRAKLIVAA DGRASPVREA
LGIDVTTTRY GQKALAFAVT HAAPHDNIST EIHRTGGPFT LVPLPDHEGR PCSAIVWMDR
GPEIARLADL PEPAFEAEMT TRSANLYGPL KLASRRTVWP IISQIADRMV GERTALVAEA
AHVVPPIGAQ GLNMSLGDIA ALLEIARAHP EDPGAAKGLA RYARARHTEV KARVTGVDAL
NRASMADAQG LRDMRLRALN GLYSVAPVRR VLMRAGLGAS G