| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1230 |
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| Symbol | |
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| ID | 3933675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1186389 |
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| End bp | 1187243 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903578 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509172 |
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| Protein GI | 89053721 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.69463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.27329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAA ACCTTGATCT CACCTCGCTC AGGGCCTTTG TAACGGTCGT TGACGCGGGC
GGTGTCACGA AAGCTTCGGG CTTTTTGAAC CTGACGCAAT CGGCGGTCTC CATGCAGCTT
AAACGGCTGG AAGAGGCGTT GGACGTGTCG CTGTTTGACC GCACCACGCG CAAGCTGAAC
CTGACGGGCG CGGGCGAACA GATGTTGGGC TATGCACGCC GGATGCTGGA GCTGAATGAT
GAGGTTCTGG GCCGCCTGAC CGCCACCGAA TATGAGGGGG AGATCGTTCT GGGTGTGCCC
GCTGACGTCG TCTACCCGGC CATCCCGGAG GTTCTGCAAC GCTTCAACAC GGCCTACCCG
CGCATGAAGG TCCATCTTCT GTCCCTCGGC ACGCTCAGCC TGAAAGCAGC GTTCGAGCGG
GGCGAGGCGG ACGTGATCCT GACCACGGAA GAGGATGTGG ACCGGGGCGG AGAGACGCTG
TTGGAGCGTC CCATGGTCTG GATCGGAGCA GAAGAGGGGC AGATGTGGAA GCAGCGCCCC
CTTCGGCTGG CGTTCGAACA CGATTGCATC TTTCGCGGCC CGGCGCTCAC GGCGCTCGAT
GCGGCAGGTA TATCCTGGGA GATGGCGGTG GACTCCGATT CGATGCGCAC CATCGAGGTC
TCCGTCAGTG CCGACCTAGC GGTTCATGCG GTCATCGAGG GGACGGAATC AGCCTATACG
TCGATCGTGC CCCACGGCGG CGCGCTGCCC GTGCTGCCCC GCATCCGCAT CAACATGTAC
CGCTCAGACC TGTCCCGGGC CGAGCCTGTA GATGCCCTTG TCGATCTGAT CCGCCAGGCC
TACCGCTCCA TCTAG
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| Protein sequence | MARNLDLTSL RAFVTVVDAG GVTKASGFLN LTQSAVSMQL KRLEEALDVS LFDRTTRKLN
LTGAGEQMLG YARRMLELND EVLGRLTATE YEGEIVLGVP ADVVYPAIPE VLQRFNTAYP
RMKVHLLSLG TLSLKAAFER GEADVILTTE EDVDRGGETL LERPMVWIGA EEGQMWKQRP
LRLAFEHDCI FRGPALTALD AAGISWEMAV DSDSMRTIEV SVSADLAVHA VIEGTESAYT
SIVPHGGALP VLPRIRINMY RSDLSRAEPV DALVDLIRQA YRSI
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