Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1228 |
Symbol | |
ID | 3933673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1185136 |
End bp | 1185894 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637903576 |
Product | hypothetical protein |
Protein accession | YP_509170 |
Protein GI | 89053719 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.181817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.877697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT ATCAGACGAT GCGCTCCCAG GGCATGGCCG GCTCCGCCGC GGAGATCGAC CAAGGCCTGC GCGCCCATAT GAACAAGGTC TACGGCACGA TGTCGATTGG CCTGTTGATC ACCTTTGCCG CTGCCTGGGC AGTCGGCGCG AACCCTGCAA TCCTGCAATA CCTGTTCAGC TTTGAGACAG GTGGTCCGAC AATTCTTGGC TGGATCGCGA TGTTCGCACC CCTTGGCATG ATCTTTGCCT TCGGTGCCGT GATCACCAAA GCGTCTGCCG CAGCCGCGCA GACATTCTTC TACGCCTTCG CGGCGGTGAT GGGCATTTCG ATTGCCTACA TCTTCGCGGT CTATACCGGC GCATCGATCG TTCAGGCGTT CCTCGTGACA TCCATTGCCT TTGCGGGCCT CAGCACCTGG GGTTATGTGA CGAAGCGGGA TATCTCCGGC TGGGGCGCGT TTCTGATCAT GGGCCTGATA GGTGGCATCG TACTGATGCT TCTGTCCTTC GCACTGTCCG CGTTCTGGGG CATTGTGATC CCCGGCTTTG ATCTGGCGTT GTCCGCGCTG CTGCTGCTGG TCTTCGCGGG TCTCACCGCC TATCACACGC AGGCGATCAA GCAGGATTAC GTTGACCACG CACAGCATGG TGACAGCGAA TGGCTGGCGA AATCCGCGAT CATGGGTGCG CTGAACCTCT ACATGTCGTT CATCAACATG TTCCTGATCA TCCTCAGCTT CCTCGGCAAC CGCGAATAA
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Protein sequence | MAEYQTMRSQ GMAGSAAEID QGLRAHMNKV YGTMSIGLLI TFAAAWAVGA NPAILQYLFS FETGGPTILG WIAMFAPLGM IFAFGAVITK ASAAAAQTFF YAFAAVMGIS IAYIFAVYTG ASIVQAFLVT SIAFAGLSTW GYVTKRDISG WGAFLIMGLI GGIVLMLLSF ALSAFWGIVI PGFDLALSAL LLLVFAGLTA YHTQAIKQDY VDHAQHGDSE WLAKSAIMGA LNLYMSFINM FLIILSFLGN RE
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