Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1214 |
Symbol | |
ID | 3933658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1174022 |
End bp | 1175167 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637903562 |
Product | signal recognition particle-docking protein FtsY |
Protein accession | YP_509156 |
Protein GI | 89053705 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0552] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.911823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAT CCTCGTCGAA ACTGGACGAG GGGCTGGATG CGATCATTGA AGACGGGGCT GCGGATGCGG CGCCTGCGCC CGAGGCCCCG ACGCCTGCGC CGGAGTTGGC CCGAACCCCT GAGCCCGAAC CCGCGCGCGA GACGGCGCCG GAGCCTGCAC CACCCCTGCC GGAACCAGAG CCCACCCCTA TTGCGGAGGG TCCGGTGGCC GCGCCGACAC CACTGCCAGC CGCTACCCCC GCCACAGAGC CTGAGCCGGC GGCCAAGCCG GGGCTGTTTG GCCGTCTCCT GGGGCGCTCC TCCGAGCCCA AGCGCGCTTT GGACGACGAC ATGTTGGAAC AGCTGGAAGA GCTGCTGATC GCCTCGGATA TGGGCGTGGA CATTGCGCTG CGTGTGACCG CCAACATGGC CGAGGGGCGC TATGGCAAGA TGCTGTCGGC CACGGAAATC AAGGAGTTGC TGGCCTCCGA GATCACGCGC GTGATGGAGC CTGTCGCGCG ACCCCTGCCG ATCTACCCGA AGACGCCACA GGTGGTGCTG GTCGTGGGCG TCAATGGCTC GGGCAAGACG ACGACCATTG GCAAACTCTC CAGCCAGTTC CGGGCGGCTG GCAAAAAGGT GGTGATCGCC GCAGGTGACA CGTTCCGCGC CGCCGCCGTG GAGCAGTTGC AGGTCTGGGG CGACCGCGCG GGCGTGCCCG TATTGACCGC GCCCGAGGGC TCCGACCCCG CCGCGCTGGC CTATGATGCC ATGGTCAAGG CGGAAGCCGA TGGCGCGGAT CTTCTGATGA TCGACACCGC AGGCCGCCTT CAAAATCGCG CCGATCTGAT GGAGGAACTG GCCAAGATCG TGCGTGTCAT TCGCAAGAAA GACCCCGATG CGCCGCACAA CACGTTGTTG GTCCTTGACG CCACGACCGG ACAGAACGCG CTTCGTCAGG TTGAGCTGTT TGGGCAGATG GCGGATGTGT CGGGCCTGGT GATGACCAAG CTGGACGGCA CCGCAAAGGG GGGCGTCCTG GTCGCGCTGG CGGACAAGTT CGGGCTTCCG ATCCATGCCA TCGGCGTTGG TGAGCAGATT GATGATCTGC AACCTTTCGA TCCCGAAGAA TTTGCCGATG CCCTTGTTGG GCTTGATCGT TCCTGA
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Protein sequence | MFKSSSKLDE GLDAIIEDGA ADAAPAPEAP TPAPELARTP EPEPARETAP EPAPPLPEPE PTPIAEGPVA APTPLPAATP ATEPEPAAKP GLFGRLLGRS SEPKRALDDD MLEQLEELLI ASDMGVDIAL RVTANMAEGR YGKMLSATEI KELLASEITR VMEPVARPLP IYPKTPQVVL VVGVNGSGKT TTIGKLSSQF RAAGKKVVIA AGDTFRAAAV EQLQVWGDRA GVPVLTAPEG SDPAALAYDA MVKAEADGAD LLMIDTAGRL QNRADLMEEL AKIVRVIRKK DPDAPHNTLL VLDATTGQNA LRQVELFGQM ADVSGLVMTK LDGTAKGGVL VALADKFGLP IHAIGVGEQI DDLQPFDPEE FADALVGLDR S
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