Gene Jann_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1210 
Symbol 
ID3933654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1170206 
End bp1170727 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID637903558 
Producttwin-arginine translocation protein TatB 
Protein accessionYP_509152 
Protein GI89053701 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01410] twin arginine-targeting protein translocase TatB 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATA TTGGCGGTAT GGAACTATTG GTCATTGGGA TCGTGGCGTT GATCGTCGTG 
GGCCCAAAAG ATTTGCCTGG CATGTTCAAG AAGCTGGGGC AGATGGTGGC CCGCGTGCGC
GCCATGGGGC GGGAGTTCAC CAATGCGATG AACGCAGCCG CAGACGACAC GGGCATGTCG
GAGATGAACC GCGATCTGCG CGCGGCCACG AAGTTCACCA ACCCCAAGGC CATGGCGAAA
GAGATGATGG GCGATGTCAT GGACGACATT GATCCGTCGA AATATGAGGA AGGCTCGGCC
ACCCGCGTCG TGGCCGAGAA GAAGGCCGCC GCCCAAAAGG ACGCGCGAGA AATGGCCGCG
AAGGCCCGTG AGATCCGCGC GGCAAAGGCC GCTGAGGCCG CCGAGTTGAG CGGAGAGCCC
GATGAAGAGG CTGTCGCAGC AGCCGAGCCT GCCGCCGTGG ACCCTGGCCC CGCAGACATT
GAAGCGGCAG ATACCGCCGA GCCGCAGGCA AACCGACCAT GA
 
Protein sequence
MPDIGGMELL VIGIVALIVV GPKDLPGMFK KLGQMVARVR AMGREFTNAM NAAADDTGMS 
EMNRDLRAAT KFTNPKAMAK EMMGDVMDDI DPSKYEEGSA TRVVAEKKAA AQKDAREMAA
KAREIRAAKA AEAAELSGEP DEEAVAAAEP AAVDPGPADI EAADTAEPQA NRP