| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1203 |
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| Symbol | |
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| ID | 3933647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1164035 |
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| End bp | 1165672 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637903551 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_509145 |
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| Protein GI | 89053694 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.949342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCA TGCCCGATAC AGCACACACC AATCGCCCCA CCCTGCCGCC CGAGATCGCG
CGTCGTCGCA CATTCGCGAT CATCTCGCAC CCCGATGCGG GAAAAACGAC GCTGACCGAG
AAGTTTCTTC TGTATGGTGG CGCGATCCAG ATGGCCGGAC AGGTGCGCGC CAAAGGTGAG
GCGCGGCGCA CGCGCTCGGA CTTCATGCAG ATGGAAAAGG ACCGGGGCAT TTCCGTCTCG
GCCTCCGCCA TGTCGTTTGA CTTCCTGACA CCGGATGTGA ATTTTCGCTT CAATCTGGTC
GACACGCCCG GCCACAGCGA CTTCTCGGAA GACACCTACC GCACGCTGAC CGCCGTGGAC
GCCGCGATCA TGGTAATCGA CGGCGCGAAG GGTGTGGAAA GCCAGACCCA GAAGCTGTTC
GAGGTCTGCC GCCTGCGCGA TCTGCCGATC CTGACATTCT GCAACAAGAT GGACCGTGAA
AGCCGCGACA CGTTCGAGAT CATCGACGAA ATTCAGGAAA ATCTGGCGAT TGACGTCACA
CCCGCCTCAT GGCCCATCGG CGTCGGGCGG GAATTTCTGG GCTGCTACGA CCTGCTCCAC
GACCGGCTGG AGCTGATGGA CCGCGCCGAC CGCAACAAGG TGGCAGAAAC GGTGTCTTTG
CAGGGCCTCG ACGATCCGGC CCTGGCTGAT CACATCCCCG CTGACCTGTT GGACAAGCTG
CGTGAAGAGG TCGAAATGGC CCGCGAATTG CTGCCCGCCA TGGATCCTGA GGCGTTTCAA
CAGGGCACGC TGACTCCGAT CTGGTTCGGC TCGGCCATGA ACTCCTTCGG CGTGAAGGAG
CTGATGGACG GCATCGCGGA ATACGGGCCT GAGCCGCAGG TACAAAACGC CGATCCTCGG
CAAGTGGCCC CCGATGAGAA GAAGGTTTCG GGTTTTGTGT TCAAGGTGCA GGCCAATATG
GACCCCAAGC ACCGGGACCG GGTGGCGTTT GTGCGGTTGG TCTCGGGCCA TTTCAATCGT
GGCATGAAGC TTACGCACGT GCGGTCGAAA AAGCCCATGG CGATCAGCAA TCCGGTGATG
TTTCTGGCCT CTGACCGGGA ATTGGCGGAA GAAGCCTGGG CCGGCGACAT CATCGGCATC
CCCAATCACG GCCAATTGCG CATCGGCGAC GCGCTGACGG AAGGGGAGGC GCTGCGCTTC
ACCGGCATCC CGTCCTTCGC GCCGGAACTG CTTCAGTCCT GCCGCGCGGG CGATCCGCTG
AAGGCCAAAC ATCTCGATAA GGCCTTGATG CAATTCGCAG AAGAGGGGGC GGCCAAGGTG
TTCAAACCGA CCTTCGGGTC CGGCTTTATC GTCGGCGTCG TGGGCGCGCT TCAATTTGAA
GTGCTCGCGA GCCGGATCGA GCTGGAATAC GGTCTTCCCG TCCGGTTCGA GGCGTCTCAA
TTCACCTCCG CCCGCTGGGT GCACGGCGAC AAGGACGCGG TGGAGGCCTT CGCCAACGCC
AACAAGCAGC ACATCGCCAC GGACAACGAC GGCGACCCGG TCTACCTCAC GCGCCTGCAA
TGGGACATCG ACCGCGTGGC CCGCGATTAT CCCGACATCA CGCTGTCGGC GACGAAAGAA
CTGATGGTCG AGCGCTGA
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| Protein sequence | MRAMPDTAHT NRPTLPPEIA RRRTFAIISH PDAGKTTLTE KFLLYGGAIQ MAGQVRAKGE
ARRTRSDFMQ MEKDRGISVS ASAMSFDFLT PDVNFRFNLV DTPGHSDFSE DTYRTLTAVD
AAIMVIDGAK GVESQTQKLF EVCRLRDLPI LTFCNKMDRE SRDTFEIIDE IQENLAIDVT
PASWPIGVGR EFLGCYDLLH DRLELMDRAD RNKVAETVSL QGLDDPALAD HIPADLLDKL
REEVEMAREL LPAMDPEAFQ QGTLTPIWFG SAMNSFGVKE LMDGIAEYGP EPQVQNADPR
QVAPDEKKVS GFVFKVQANM DPKHRDRVAF VRLVSGHFNR GMKLTHVRSK KPMAISNPVM
FLASDRELAE EAWAGDIIGI PNHGQLRIGD ALTEGEALRF TGIPSFAPEL LQSCRAGDPL
KAKHLDKALM QFAEEGAAKV FKPTFGSGFI VGVVGALQFE VLASRIELEY GLPVRFEASQ
FTSARWVHGD KDAVEAFANA NKQHIATDND GDPVYLTRLQ WDIDRVARDY PDITLSATKE
LMVER
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