| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1197 |
|---|
| Symbol | |
|---|
| ID | 3933641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1157552 |
|---|
| End bp | 1158307 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637903545 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_509139 |
|---|
| Protein GI | 89053688 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGGTG GGGCCACAGG CGCTTGGCCC CTGGGTGTCT CCCGCCGTGT CCTTGCCACC
ACCGACAGCA CGATGCTGGA GGCCGCGCGC GCCGCGCCCA CGCTGACCGG GCCGGAATGG
GTGCTGGCGC TGCACCAGAC CGCCGCCAGG GGCCGCCGGG GGCGGGCTTG GGTCATGCCA
TCGGGCAATT TCGCGGCGTC GCTGACGCTG CAACCCTCCG GGCCGCTGGC TCAGATCGCG
CTGCGCTCTT TCGCGGCCGC CACCGCTCTG CGCGACGCGC TTATCGCCGT TGGCTGCCCT
CCGGGCGACG TGTCCCTGAA ATGGCCCAAT GATGTGCTGT TGCGAGGCGG CAAGGTGGCG
GGCATTTTGC TGGAAAGCAT CGGCGACGGG CGCGGCGGGG TCAGCCACCT GATCATCGGG
ATTGGCGTCA ACCTGGCTCA CGCGCCGGAT CCCTCCGAGG TGGAGGCCCG CGCCGTGACC
CCCGTGGCCC TGGGCCTGGA TGTCACGCCG GAAGACTTTC TTGACGCCCT CGCCCCCGCC
TTTGCCAGCC GCGAATACAG CCTTGCCACC TATGGATTTG ACCCCACACG CACCGAATGG
CTGGCCCATG CCGCACGTCT GGAGGAGGTC ATCACCGCGC GCCTACCGGG CGAAGAGATC
ACCGGCACCT TTCGCACCAT CGACGAGACG GGCAATCTGA TCCTTGAAAC CGCCCATGGA
CCGCGCGCCA TCGCAGCGGC TGATATCTAC TTTTGA
|
|---|
| Protein sequence | MSGGATGAWP LGVSRRVLAT TDSTMLEAAR AAPTLTGPEW VLALHQTAAR GRRGRAWVMP
SGNFAASLTL QPSGPLAQIA LRSFAAATAL RDALIAVGCP PGDVSLKWPN DVLLRGGKVA
GILLESIGDG RGGVSHLIIG IGVNLAHAPD PSEVEARAVT PVALGLDVTP EDFLDALAPA
FASREYSLAT YGFDPTRTEW LAHAARLEEV ITARLPGEEI TGTFRTIDET GNLILETAHG
PRAIAAADIY F
|
|---|
| |