| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1187 |
|---|
| Symbol | |
|---|
| ID | 3933631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1149056 |
|---|
| End bp | 1149550 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637903535 |
|---|
| Product | NADH dehydrogenase subunit I |
|---|
| Protein accession | YP_509129 |
|---|
| Protein GI | 89053678 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.438944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA TCGACTACAC CCGCGCCGCG AAATATTTCC TGCTGGCGGA CTTTTTCAAA
GGCTTCAAGC TGGGGATGAA GTACTTCTTC GCCCCCAAGG TCACGATCAA CTACCCGCAT
GAGAAGGGGC CTCTGTCGCC CCGCTTCCGC GGCGAACATG CGTTGCGGCG CTATCCCAAC
GGCGAAGAAC GCTGCATCGC CTGCAAGCTG TGCGAAGCCA TTTGCCCGGC GCAAGCGATC
ACGATTGATG CAGAACCCCG CGAAGACGGG TCCCGCCGCA CCACGCGGTA TGACATCGAC
ATGACCAAAT GCATCTACTG CGGGTTCTGT CAGGAAGCCT GCCCGGTGGA TGCCATCGTG
GAGGGTCCAA ATTTCGAGTT CGCGACCGAG ACCCGGGAAG AGCTGTATTA CGACAAGGAA
AAGTTGCTGG CCAACGGCGA ACGTTGGGAA TCGGCGATTG CCCACAATCT GGAACTGGAT
GCCCCCTACC GATGA
|
|---|
| Protein sequence | MTQIDYTRAA KYFLLADFFK GFKLGMKYFF APKVTINYPH EKGPLSPRFR GEHALRRYPN
GEERCIACKL CEAICPAQAI TIDAEPREDG SRRTTRYDID MTKCIYCGFC QEACPVDAIV
EGPNFEFATE TREELYYDKE KLLANGERWE SAIAHNLELD APYR
|
|---|
| |